| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2006_02 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2006_02 | THIS_month:psum | 2.4 | 2.3 | 3.8 | 7.1 | 16.2 | 21.9 | 59.2 | 23.8 | 27.1 | 31 | 85.1 |
| fr | 2006_02 | 1wsp:A | 1.1 | 2.0 | -1.650811e+01 | -3.710854e+00 | 7.2e+00 | 1.2e+01 | 4.5e+01 | 6.8 | 2.2e+01 | 2.5e+01 | 83 |
| fr | 2006_02 | 1yr1:A | 2.3 | 2.3 | -1.566154e+01 | -4.433056e+00 | 6.7e+00 | 1.4e+01 | 3.3e+01 | 2.3 | 1.3e+01 | 2.2e+01 | 119 |
| fr | 2006_02 | 1z65:A | 1.0 | 0 | -4.072000e+01 | -2.036000e+01 | 4.7e+01 | 5.0e+01 | 5.0e+01 | 62 | 0.0e+00 | 0.0e+00 | 30 |
| fr | 2006_02 | 1z8y:I | 1.2 | 2.3 | -2.776364e+01 | -1.970319e+01 | 4.2e+01 | 4.5e+01 | 7.1e+01 | 143 | 4.8e+01 | 5.2e+01 | 31 |
| fr | 2006_02 | 1z8y:J | 1.5 | 2.6 | -1.453502e+01 | -1.189306e+01 | 1.7e+01 | 3.3e+01 | 7.5e+01 | 110 | 4.4e+01 | 4.4e+01 | 36 |
| fr | 2006_02 | 2aql:A | 1.9 | 2.3 | -7.271429e+00 | 2.042102e+00 | 1.3e+00 | 1.3e+00 | 5.3e+01 | 0.81 | 1.7e+01 | 2.2e+01 | 158 |
| fr | 2006_02 | 2byf:A | 2.5 | 2.3 | -8.111435e+00 | -1.485524e+00 | 2.6e+00 | 6.9e+00 | 6.5e+01 | 0.09 | 1.7e+01 | 2.2e+01 | 116 |
| fr | 2006_02 | 2cs7:A | 1.1 | 2.0 | -1.416058e+01 | -1.080586e+01 | 1.3e+01 | 2.0e+01 | 7.8e+01 | 6.7 | 3.3e+01 | 4.5e+01 | 55 |
| fr | 2006_02 | 2d4z:A | 7.4 | 4.4 | -1.131111e+01 | 9.294634e+00 | 2.7e+01 | 3.0e+01 | 3.2e+01 | 0.13 | 2.7e+01 | 3.0e+01 | 169 |
| fr | 2006_02 | 2ezw:A | 2.6 | 2.6 | -1.850909e+01 | -5.219024e+00 | 2.8e+01 | 3.6e+01 | 6.6e+01 | 0.33 | 3.8e+01 | 4.4e+01 | 50 |
| fr | 2006_02 | 2fid:B | 2.0 | 2.0 | -1.299571e+01 | -1.004028e+01 | 5.0e+00 | 1.0e+01 | 7.8e+01 | 0.79 | 2.3e+01 | 2.7e+01 | 60 |
| fr | 2006_02 | 2fiu:A | 4.6 | 3.7 | -1.017977e+01 | 9.525204e+00 | 2.4e+01 | 2.6e+01 | 6.5e+01 | 0.16 | 3.1e+01 | 3.3e+01 | 93 |
| fr | 2006_02 | 2fqm:A | 4.1 | 3.3 | -1.607368e+01 | 1.191376e+01 | 6.2e+00 | 2.2e+01 | 5.8e+01 | 0.01 | 4.8e+01 | 4.8e+01 | 65 |
| fr | 2006_02 | 2fug:7 | 1.3 | 1.2 | 3.820969e+00 | 3.148150e+00 | 0.0e+00 | 1.6e+00 | 6.1e+01 | 0.29 | 1.9e+01 | 2.0e+01 | 127 |
| fr | 2006_02 | THIS_month:psum | 2.4 | 2.3 | 3.8 | 7.1 | 16.2 | 21.9 | 59.2 | 23.8 | 27.1 | 31 | 85.1 |
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |