| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 665 |
| NWEEKS : | 300 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2006_02 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 5.8 | 3.0 | 4.1 | 7.5 | 23.9 | 33.4 | 87.9 | 7.6 | 44.3 | 50.0 | 138.4 |
| fr | 2006_02 | THIS_month:psum | 6.0 | 3.1 | 16.7 | 12.2 | 36.3 | 46 | 91.7 | 15.2 | 54.5 | 59.3 | 85.1 |
| fr | 2006_02 | 1wsp:A | 6.5 | 2.8 | -8.036842e+00 | 8.800544e+00 | 2.2e+01 | 4.1e+01 | 9.2e+01 | 5.00e+00 | 5.9e+01 | 7.1e+01 | 83 |
| fr | 2006_02 | 1yr1:A | 4.2 | 2.6 | -6.786667e+00 | -5.983171e-02 | 1.0e+01 | 1.8e+01 | 7.6e+01 | 1.04e+00 | 2.4e+01 | 2.9e+01 | 119 |
| fr | 2006_02 | 1z65:A | 3.3 | 2.6 | -3.296636e+00 | -3.575833e+00 | 6.0e+01 | 6.7e+01 | 9.3e+01 | 4.41e+01 | 6.0e+01 | 6.3e+01 | 30 |
| fr | 2006_02 | 1z8y:I | 3.9 | 3.7 | 2.320053e+01 | 1.838707e+01 | 9.4e+01 | 9.4e+01 | 9.4e+01 | 8.04e+01 | 8.7e+01 | 8.7e+01 | 31 |
| fr | 2006_02 | 1z8y:J | 4.3 | 3.7 | 2.273416e+01 | 3.256367e+01 | 8.3e+01 | 8.6e+01 | 9.4e+01 | 3.56e+00 | 8.3e+01 | 8.3e+01 | 36 |
| fr | 2006_02 | 2aql:A | 3.1 | 2.0 | -4.301408e+00 | 9.606494e-01 | 3.8e+00 | 1.0e+01 | 9.0e+01 | 8.29e-01 | 2.2e+01 | 2.9e+01 | 158 |
| fr | 2006_02 | 2byf:A | 10.8 | 3.5 | 1.667579e+01 | 1.336518e+01 | 6.2e+01 | 6.7e+01 | 9.4e+01 | 8.65e-01 | 6.6e+01 | 7.2e+01 | 116 |
| fr | 2006_02 | 2cs7:A | 4.1 | 2.0 | -1.013088e+01 | 1.303294e+01 | 4.5e+01 | 5.1e+01 | 9.5e+01 | 1.60e+01 | 5.3e+01 | 5.6e+01 | 55 |
| fr | 2006_02 | 2d4z:A | 13.4 | 4.6 | -4.847619e+00 | 8.030156e+00 | 1.5e+01 | 3.6e+01 | 7.5e+01 | 2.68e-01 | 4.7e+01 | 5.3e+01 | 169 |
| fr | 2006_02 | 2ezw:A | 4.6 | 3.3 | -1.221600e+01 | 1.525735e+01 | 5.4e+01 | 6.2e+01 | 1.0e+02 | 5.29e-02 | 6.2e+01 | 6.6e+01 | 50 |
| fr | 2006_02 | 2fid:B | 1.6 | 3.1 | -7.252961e+00 | 7.110671e-01 | 1.5e+01 | 2.8e+01 | 9.3e+01 | 2.23e+01 | 4.2e+01 | 4.2e+01 | 60 |
| fr | 2006_02 | 2fiu:A | 10.4 | 3.5 | -3.698230e+00 | 1.245327e+01 | 3.2e+01 | 5.5e+01 | 9.6e+01 | 1.71e-01 | 6.2e+01 | 7.1e+01 | 93 |
| fr | 2006_02 | 2fqm:A | 3.0 | 3.3 | -1.001311e+01 | 1.630985e+01 | 7.7e+00 | 1.5e+01 | 9.4e+01 | 3.82e+01 | 4.6e+01 | 4.8e+01 | 65 |
| fr | 2006_02 | 2fug:7 | 12.1 | 2.8 | 4.364933e+00 | 7.379757e+00 | 5.5e+00 | 1.4e+01 | 9.8e+01 | 1.10e+00 | 5.0e+01 | 6.1e+01 | 127 |
| fr | 2006_02 | THIS_month:psum | 6.0 | 3.1 | 16.7 | 12.2 | 36.3 | 46 | 91.7 | 15.2 | 54.5 | 59.3 | 85.1 |
| fr | 2006_11_16 | psum | 5.8 | 3.0 | 4.1 | 7.5 | 23.9 | 33.4 | 87.9 | 7.6 | 44.3 | 50.0 | 138.4 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |