| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2006_01 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2006_01 | THIS_month:psum | 2.8 | 2.1 | 27.9 | 7.2 | 17.0 | 23.0 | 55.6 | 9.0 | 27.1 | 30.0 | 105.8 |
| fr | 2006_01 | 1yhp:A | 7.2 | 4.1 | -8.864006e+00 | 7.061014e+00 | 2.0e+01 | 2.2e+01 | 2.3e+01 | 4.0 | 2.0e+01 | 2.1e+01 | 212 |
| fr | 2006_01 | 1zw8:A | 2.9 | 2.6 | -1.611228e+01 | -6.180407e+00 | 3.8e+01 | 3.8e+01 | 5.0e+01 | 3.1 | 3.8e+01 | 3.8e+01 | 64 |
| fr | 2006_01 | 2acm:B | 1.2 | 2.3 | -1.696667e+01 | -2.274396e+00 | 1.7e+01 | 3.0e+01 | 7.7e+01 | 5.2 | 4.3e+01 | 4.5e+01 | 47 |
| fr | 2006_01 | 2av5:A | 2.9 | 2.3 | -6.106738e+00 | 1.872478e+00 | 8.5e+00 | 1.2e+01 | 9.4e+01 | 0.57 | 3.4e+01 | 4.3e+01 | 106 |
| fr | 2006_01 | 2aze:C | 2.7 | 2.6 | -2.036000e+01 | 3.421902e-01 | 2.0e+01 | 3.9e+01 | 6.8e+01 | 14 | 5.2e+01 | 5.2e+01 | 44 |
| fr | 2006_01 | 2b38:A | 2.7 | 2.6 | 2.795205e+01 | 2.073871e+01 | 7.4e+01 | 7.4e+01 | 8.1e+01 | 6.3 | 7.4e+01 | 7.4e+01 | 31 |
| fr | 2006_01 | 2bai:A | 0.6 | 0 | -2.349231e+01 | -1.908750e+01 | 9.4e+00 | 2.2e+01 | 8.1e+01 | 88 | 0.0e+00 | 0.0e+00 | 32 |
| fr | 2006_01 | 2bkd:N | 0.2 | 1.6 | -1.388182e+01 | -3.667006e+00 | 1.5e+00 | 3.1e+00 | 3.4e+01 | 2.2 | 1.4e+01 | 1.8e+01 | 131 |
| fr | 2006_01 | 2c6a:A | 3.1 | 3.1 | -2.106207e+01 | -1.320999e+01 | 5.0e+01 | 5.2e+01 | 6.3e+01 | 4.4 | 5.0e+01 | 5.4e+01 | 46 |
| fr | 2006_01 | 2d0t:A | 12.7 | 3.7 | -4.302946e+00 | 6.245600e+00 | 1.1e+01 | 1.9e+01 | 3.1e+01 | 0.05 | 2.5e+01 | 2.8e+01 | 373 |
| fr | 2006_01 | 2d1e:A | 2.8 | 2.0 | -7.331799e+00 | -2.174045e-02 | 2.1e+00 | 3.3e+00 | 3.4e+01 | 0.39 | 1.2e+01 | 1.4e+01 | 243 |
| fr | 2006_01 | 2ey4:C | 1.2 | 2.3 | -1.558340e+01 | -8.038466e+00 | 1.4e+00 | 8.2e+00 | 5.2e+01 | 0.86 | 2.1e+01 | 2.3e+01 | 73 |
| fr | 2006_01 | 2f9d:P | 0.5 | 0 | -2.262222e+01 | -1.650811e+01 | 2.2e+01 | 2.7e+01 | 7.3e+01 | 2.5 | 0.0e+00 | 0.0e+00 | 37 |
| fr | 2006_01 | 2f9h:A | 3.1 | 2.0 | -9.116418e+00 | -2.503093e+00 | 1.7e+00 | 3.4e+00 | 5.6e+01 | 0.88 | 1.6e+01 | 2.2e+01 | 119 |
| fr | 2006_01 | 2fa8:A | 1.0 | 1.2 | -2.177766e+01 | -7.108223e+00 | 3.5e+00 | 1.2e+01 | 3.3e+01 | 8.1 | 1.8e+01 | 2.1e+01 | 85 |
| fr | 2006_01 | 2fb6:A | 2.5 | 2.0 | -1.221501e+01 | -8.297596e-01 | 9.0e+00 | 1.4e+01 | 4.5e+01 | 0.67 | 2.8e+01 | 3.3e+01 | 111 |
| fr | 2006_01 | 2fft:A | 1.3 | 2.3 | -1.272500e+01 | -6.373232e+00 | 1.2e+00 | 4.8e+00 | 5.7e+01 | 4.0 | 2.3e+01 | 2.4e+01 | 84 |
| fr | 2006_01 | 2fk4:A | 2.5 | 1.6 | -1.850909e+01 | -7.251549e+00 | 1.6e+01 | 3.1e+01 | 4.9e+01 | 18 | 2.1e+01 | 3.1e+01 | 67 |
| fr | 2006_01 | THIS_month:psum | 2.8 | 2.1 | 27.9 | 7.2 | 17.0 | 23.0 | 55.6 | 9.0 | 27.1 | 30.0 | 105.8 |
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |