| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2005_12 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2005_12 | THIS_month:psum | 2.9 | 2.4 | 46.7 | 11.0 | 29.0 | 33.3 | 62.1 | 16.8 | 38.7 | 43 | 82.3 |
| fr | 2005_12 | 1wqb:A | 1.0 | 2.0 | -3.054000e+01 | -1.908750e+01 | 2.8e+01 | 3.4e+01 | 6.2e+01 | 114 | 3.8e+01 | 4.1e+01 | 32 |
| fr | 2005_12 | 1y43:A | 2.7 | 2.8 | 4.677904e+01 | -1.639701e+01 | 7.2e+01 | 7.2e+01 | 7.8e+01 | 0.97 | 7.2e+01 | 7.2e+01 | 32 |
| fr | 2005_12 | 1ya5:T | 0.9 | 0.7 | -1.357333e+01 | -6.844388e+00 | 6.7e+00 | 1.2e+01 | 5.1e+01 | 3.3 | 1.8e+01 | 2.1e+01 | 89 |
| fr | 2005_12 | 1zza:A | 0.5 | 2.0 | -1.027855e+01 | -6.219558e+00 | 2.2e+00 | 5.6e+00 | 5.7e+01 | 8.0 | 2.0e+01 | 2.6e+01 | 90 |
| fr | 2005_12 | 2ari:A | 2.0 | 2.8 | -1.677065e+01 | -1.735054e+01 | 5.0e+01 | 5.3e+01 | 8.7e+01 | 8.4 | 6.0e+01 | 6.0e+01 | 30 |
| fr | 2005_12 | 2c34:A | 2.0 | 2.0 | -7.582049e+00 | -1.421151e+00 | 8.6e+00 | 1.2e+01 | 6.7e+01 | 0.11 | 2.2e+01 | 4.1e+01 | 116 |
| fr | 2005_12 | 2cwz:A | 12.6 | 5.2 | -5.581332e+00 | 2.049884e+01 | 6.2e+01 | 6.3e+01 | 6.3e+01 | 0.08 | 6.2e+01 | 6.3e+01 | 133 |
| fr | 2005_12 | 2f22:A | 1.7 | 2.0 | -1.180195e+01 | 1.696291e+00 | 2.9e+00 | 1.5e+01 | 3.2e+01 | 0.27 | 1.8e+01 | 2.0e+01 | 137 |
| fr | 2005_12 | THIS_month:psum | 2.9 | 2.4 | 46.7 | 11.0 | 29.0 | 33.3 | 62.1 | 16.8 | 38.7 | 43 | 82.3 |
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |