| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2005_11 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2005_11 | THIS_month:psum | 1.5 | 1.8 | 6.6 | 6.0 | 11.6 | 18.6 | 55.1 | 11.7 | 28.5 | 33.0 | 71 |
| fr | 2005_11 | 1x0t:A | 1.8 | 1.2 | -9.112763e+00 | -3.504423e+00 | 1.1e+01 | 1.3e+01 | 6.3e+01 | 3.6 | 2.6e+01 | 3.4e+01 | 106 |
| fr | 2005_11 | 1z8m:A | 1.8 | 2.3 | -3.054000e+01 | -6.940909e+00 | 1.2e+01 | 1.6e+01 | 2.3e+01 | 43 | 1.8e+01 | 1.9e+01 | 88 |
| fr | 2005_11 | 2a41:C | 0.8 | 1.6 | -2.349231e+01 | -1.908750e+01 | 4.1e+01 | 4.1e+01 | 8.1e+01 | 2.1 | 3.8e+01 | 4.7e+01 | 32 |
| fr | 2005_11 | 2agh:C | 1.4 | 2.3 | -3.393333e+01 | -1.970323e+01 | 1.9e+01 | 4.2e+01 | 5.8e+01 | 48 | 4.8e+01 | 5.2e+01 | 31 |
| fr | 2005_11 | 2ahm:A | 1.5 | 2.0 | -1.908750e+01 | -4.627946e+00 | 1.0e+01 | 1.9e+01 | 4.2e+01 | 2.7 | 2.2e+01 | 2.7e+01 | 77 |
| fr | 2005_11 | 2ahm:E | 3.5 | 2.6 | -1.676465e+01 | 1.363696e+00 | 1.3e+00 | 3.2e+00 | 2.3e+01 | 11 | 1.4e+01 | 1.7e+01 | 155 |
| fr | 2005_11 | 2auh:B | 0.5 | 2.0 | -2.262222e+01 | -1.616545e+01 | 5.4e+00 | 1.6e+01 | 7.3e+01 | 9.6 | 4.9e+01 | 5.4e+01 | 37 |
| fr | 2005_11 | 2avy:U | 2.9 | 2.6 | -1.207750e+01 | -6.184743e+00 | 1.6e+01 | 2.9e+01 | 9.6e+01 | 3.3 | 3.9e+01 | 5.1e+01 | 51 |
| fr | 2005_11 | 2b1y:A | 0.8 | 1.6 | -1.131111e+01 | -5.883785e+00 | 4.1e+00 | 1.0e+01 | 5.5e+01 | 3.4 | 1.7e+01 | 2.2e+01 | 98 |
| fr | 2005_11 | 2b7e:A | 0.5 | 0.0 | -2.349148e+01 | -9.929903e+00 | 8.5e+00 | 1.2e+01 | 4.4e+01 | 3.1 | 2.2e+01 | 2.4e+01 | 59 |
| fr | 2005_11 | 2bnl:A | 2.0 | 3.1 | 6.670029e+00 | 4.419532e+00 | 3.9e+00 | 5.5e+00 | 4.4e+01 | 6.2 | 2.1e+01 | 2.4e+01 | 127 |
| fr | 2005_11 | 2bx9:A | 1.3 | 2.6 | -2.320862e+01 | -1.145575e+01 | 1.5e+01 | 1.5e+01 | 4.9e+01 | 6.9 | 4.0e+01 | 4.2e+01 | 53 |
| fr | 2005_11 | 2c1m:B | 0.3 | 0.7 | -1.489756e+01 | -1.324793e+01 | 2.2e+00 | 6.5e+00 | 8.9e+01 | 8.2 | 2.4e+01 | 3.5e+01 | 46 |
| fr | 2005_11 | 2c55:A | 0.2 | 0 | -4.698462e+01 | -1.174615e+01 | 1.7e+01 | 2.3e+01 | 2.5e+01 | 13 | 0.0e+00 | 0.0e+00 | 52 |
| fr | 2005_11 | 2c5z:A | 4.6 | 3.7 | -1.272500e+01 | 1.249669e+01 | 1.1e+01 | 2.4e+01 | 5.2e+01 | 1.1 | 3.7e+01 | 3.9e+01 | 93 |
| fr | 2005_11 | 2esy:A | 0.6 | 0.7 | -3.054000e+01 | -1.970323e+01 | 9.7e+00 | 2.3e+01 | 6.5e+01 | 22 | 4.2e+01 | 4.2e+01 | 31 |
| fr | 2005_11 | THIS_month:psum | 1.5 | 1.8 | 6.6 | 6.0 | 11.6 | 18.6 | 55.1 | 11.7 | 28.5 | 33.0 | 71 |
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |