| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2005_10 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2005_10 | THIS_month:psum | 1.5 | 1.9 | 20.4 | 15.2 | 21.1 | 52.4 | 6.7 | 26.8 | 29.9 | 80.8 | |
| fr | 2005_10 | 1utu:A | 2.0 | 2.8 | -2.262222e+01 | 3.255704e+00 | 1.6e+01 | 1.8e+01 | 2.8e+01 | 8.4 | 2.0e+01 | 2.0e+01 | 96 |
| fr | 2005_10 | 1wq6:A | 0.5 | 1.6 | -1.527000e+01 | -1.059014e+01 | 7.0e+00 | 1.4e+01 | 7.0e+01 | 2.5 | 2.5e+01 | 2.8e+01 | 57 |
| fr | 2005_10 | 1z96:A | 4.9 | 4.2 | -1.650811e+01 | 3.761232e+01 | 8.4e+01 | 8.7e+01 | 9.7e+01 | 1.0 | 8.4e+01 | 8.4e+01 | 38 |
| fr | 2005_10 | 1zrx:A | 0.9 | 1.6 | -2.036000e+01 | -1.454212e+01 | 9.5e+00 | 1.4e+01 | 7.1e+01 | 6.5 | 1.9e+01 | 2.9e+01 | 42 |
| fr | 2005_10 | 2aff:B | 0.0 | 0.7 | -2.655652e+01 | -1.650811e+01 | 8.1e+00 | 1.9e+01 | 6.2e+01 | 33 | 2.7e+01 | 2.7e+01 | 37 |
| fr | 2005_10 | 2atz:A | 0.2 | 2.3 | -1.607368e+01 | -2.400449e+00 | 0.0e+00 | 5.8e-01 | 2.2e+01 | 1.3 | 9.9e+00 | 1.2e+01 | 172 |
| fr | 2005_10 | 2au5:A | 1.0 | 0 | -1.696667e+01 | -3.466608e+00 | 1.6e+00 | 4.0e+00 | 2.9e+01 | 1.9 | 1.1e+01 | 1.6e+01 | 124 |
| fr | 2005_10 | 2b9d:A | 2.4 | 2.6 | -2.106207e+01 | -1.001176e+01 | 1.2e+01 | 2.9e+01 | 5.6e+01 | 9.3 | 3.5e+01 | 4.0e+01 | 52 |
| fr | 2005_10 | 2c3g:A | 1.7 | 1.6 | -1.466486e+01 | -2.803926e+00 | 7.1e+00 | 1.2e+01 | 4.2e+01 | 2.8 | 1.3e+01 | 1.5e+01 | 98 |
| fr | 2005_10 | 2c3v:A | 1.7 | 2.0 | -1.420465e+01 | -4.958372e+00 | 7.6e+00 | 1.4e+01 | 4.7e+01 | 0.68 | 2.5e+01 | 2.8e+01 | 92 |
| fr | 2005_10 | THIS_month:psum | 1.5 | 1.9 | 20.4 | 15.2 | 21.1 | 52.4 | 6.7 | 26.8 | 29.9 | 80.8 | |
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |