| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2005_09 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2005_09 | THIS_month:psum | 1.2 | 2.3 | 4.9 | 9.0 | 40 | 5.6 | 17.7 | 20.3 | 220.5 | ||
| fr | 2005_09 | 1wpi:A | 1.1 | 2.3 | -8.232318e+00 | -2.813934e+00 | 2.3e+00 | 3.0e+00 | 5.5e+01 | 0.14 | 1.2e+01 | 1.9e+01 | 133 |
| fr | 2005_09 | 1wru:A | 0.9 | 2.0 | -8.600795e+00 | -1.134806e+00 | 9.2e-01 | 1.8e+00 | 2.2e+01 | 4.3 | 6.8e+00 | 8.0e+00 | 325 |
| fr | 2005_09 | 1x32:A | 3.0 | 2.8 | -1.420465e+01 | -1.032633e+01 | 3.0e+01 | 4.5e+01 | 9.1e+01 | 0.69 | 4.5e+01 | 4.9e+01 | 47 |
| fr | 2005_09 | 1x3q:A | 1.1 | 2.3 | -1.416941e+01 | -8.337628e+00 | 0.0e+00 | 8.8e+00 | 7.5e+01 | 5.5 | 3.0e+01 | 3.2e+01 | 57 |
| fr | 2005_09 | 1xeq:A | 1.4 | 2.8 | -2.106207e+01 | -1.734698e+00 | 4.5e+00 | 9.0e+00 | 3.3e+01 | 4.9 | 3.1e+01 | 3.1e+01 | 89 |
| fr | 2005_09 | 1zi7:A | 1.1 | 2.6 | -1.357333e+01 | -1.270803e+00 | 2.5e-01 | 7.5e-01 | 1.1e+01 | 24 | 3.7e+00 | 5.5e+00 | 402 |
| fr | 2005_09 | 1zy7:A | 0.7 | 2.0 | -1.110545e+01 | -1.148550e+00 | 0.0e+00 | 2.6e-01 | 1.5e+01 | 3.2 | 6.6e+00 | 7.4e+00 | 378 |
| fr | 2005_09 | 2cy7:A | 0.7 | 1.6 | -1.035254e+01 | -1.376913e+00 | 1.5e+00 | 3.6e+00 | 1.8e+01 | 2.6 | 6.6e+00 | 1.1e+01 | 333 |
| fr | 2005_09 | THIS_month:psum | 1.2 | 2.3 | 4.9 | 9.0 | 40 | 5.6 | 17.7 | 20.3 | 220.5 | ||
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |