| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2005_08 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2005_08 | THIS_month:psum | 3.1 | 2.2 | 8.7 | 12.2 | 17.8 | 46.6 | 33.5 | 27.9 | 31.4 | 161.5 | |
| fr | 2005_08 | 1t0c:A | 0.8 | 1.6 | -2.106207e+01 | -1.965493e+01 | 1.6e+01 | 2.3e+01 | 9.4e+01 | 12 | 4.8e+01 | 5.5e+01 | 31 |
| fr | 2005_08 | 1wmm:A | 2.0 | 2.0 | -1.272500e+01 | -2.895244e+00 | 7.0e-01 | 1.4e+00 | 3.4e+01 | 1.6 | 1.5e+01 | 2.1e+01 | 143 |
| fr | 2005_08 | 1z4h:A | 1.9 | 2.3 | -2.181429e+01 | -8.362272e+00 | 1.7e+01 | 2.7e+01 | 4.2e+01 | 21 | 2.7e+01 | 2.9e+01 | 66 |
| fr | 2005_08 | 1zeq:X | 5.7 | 3.3 | -9.812093e+00 | 8.601100e+00 | 2.3e+01 | 3.5e+01 | 7.4e+01 | 2.0 | 6.1e+01 | 6.4e+01 | 84 |
| fr | 2005_08 | 1zrl:A | 3.8 | 0 | -1.745143e+01 | 9.327799e-01 | 3.4e-01 | 1.2e+00 | 6.0e+00 | 69 | 0.0e+00 | 0.0e+00 | 583 |
| fr | 2005_08 | 1zv1:A | 0.2 | 1.2 | -1.388182e+01 | -1.035095e+01 | 0.0e+00 | 3.4e+00 | 7.5e+01 | 5.3 | 3.4e+01 | 3.6e+01 | 59 |
| fr | 2005_08 | 2a1j:A | 1.7 | 2.0 | -1.357333e+01 | -6.502624e+00 | 8.1e+00 | 1.8e+01 | 7.3e+01 | 5.5 | 3.5e+01 | 4.5e+01 | 62 |
| fr | 2005_08 | 2a1x:A | 9.5 | 2.8 | -8.366940e+00 | 5.181891e+00 | 1.5e+01 | 2.0e+01 | 2.9e+01 | 0.04 | 1.0e+01 | 1.2e+01 | 253 |
| fr | 2005_08 | 2a20:A | 5.0 | 4.1 | -1.745143e+01 | 2.035663e+01 | 5.8e+01 | 5.8e+01 | 5.8e+01 | 1.9 | 5.8e+01 | 5.8e+01 | 60 |
| fr | 2005_08 | 2a65:A | 2.5 | 1.2 | -1.650811e+01 | -1.120258e+00 | 1.8e+00 | 2.9e+00 | 7.3e+00 | 264 | 1.8e+00 | 4.3e+00 | 509 |
| fr | 2005_08 | 2a6q:A | 3.3 | 2.8 | -1.454286e+01 | -3.286965e+00 | 1.0e+01 | 2.0e+01 | 4.9e+01 | 29 | 2.6e+01 | 3.4e+01 | 86 |
| fr | 2005_08 | 2a6q:E | 2.3 | 2.8 | -2.036000e+01 | -8.457069e-01 | 2.4e+00 | 9.5e+00 | 3.6e+01 | 20 | 2.5e+01 | 2.6e+01 | 84 |
| fr | 2005_08 | 2a7y:A | 1.9 | 2.6 | -2.655652e+01 | -7.160336e+00 | 7.5e+00 | 1.2e+01 | 2.9e+01 | 4.8 | 2.2e+01 | 2.4e+01 | 80 |
| fr | 2005_08 | THIS_month:psum | 3.1 | 2.2 | 8.7 | 12.2 | 17.8 | 46.6 | 33.5 | 27.9 | 31.4 | 161.5 | |
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |