| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 665 |
| NWEEKS : | 300 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2005_08 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 5.8 | 3.0 | 4.1 | 7.5 | 23.9 | 33.4 | 87.9 | 7.6 | 44.3 | 50.0 | 138.4 |
| fr | 2005_08 | THIS_month:psum | 4.2 | 2.8 | 4.3 | 7.1 | 16.7 | 27.1 | 89.3 | 8.2 | 37.6 | 45.2 | 161.5 |
| fr | 2005_08 | 1t0c:A | 0.2 | 0.7 | -2.349231e+01 | -1.968919e+01 | 1.6e+01 | 2.6e+01 | 8.4e+01 | 3.42e+01 | 3.2e+01 | 4.8e+01 | 31 |
| fr | 2005_08 | 1wmm:A | 2.0 | 2.3 | -5.456698e+00 | 1.228259e+00 | 2.1e+00 | 5.6e+00 | 7.8e+01 | 1.17e+01 | 2.4e+01 | 2.9e+01 | 143 |
| fr | 2005_08 | 1z4h:A | 1.4 | 2.0 | -3.987991e+00 | -6.320342e+00 | 1.2e+01 | 2.4e+01 | 8.9e+01 | 1.11e+01 | 3.3e+01 | 3.9e+01 | 66 |
| fr | 2005_08 | 1zeq:X | 8.2 | 3.3 | -7.724733e+00 | 1.181949e+01 | 3.1e+01 | 5.8e+01 | 9.0e+01 | 1.82e+00 | 6.3e+01 | 6.9e+01 | 84 |
| fr | 2005_08 | 1zrl:A | 2.0 | 3.7 | 2.367642e+00 | 2.172843e+00 | 6.9e-01 | 1.2e+00 | 8.2e+01 | 1.91e-01 | 1.0e+01 | 1.1e+01 | 583 |
| fr | 2005_08 | 1zv1:A | 2.6 | 3.3 | 9.897312e+00 | 1.328495e+01 | 1.0e+01 | 2.0e+01 | 1.0e+02 | 1.97e+01 | 4.9e+01 | 5.3e+01 | 59 |
| fr | 2005_08 | 2a1j:A | 6.7 | 3.7 | -1.018000e+01 | 8.991289e+00 | 5.2e+01 | 7.1e+01 | 9.7e+01 | 3.72e+00 | 6.3e+01 | 6.9e+01 | 62 |
| fr | 2005_08 | 2a1x:A | 9.6 | 3.1 | 2.435636e+00 | 7.492390e+00 | 1.2e+01 | 2.1e+01 | 9.1e+01 | 2.34e-01 | 4.5e+01 | 5.5e+01 | 253 |
| fr | 2005_08 | 2a20:A | 7.3 | 4.2 | -1.018000e+01 | 1.808979e+01 | 5.5e+01 | 7.2e+01 | 1.0e+02 | 1.12e+00 | 6.7e+01 | 7.5e+01 | 60 |
| fr | 2005_08 | 2a65:A | 3.7 | 3.9 | 2.450855e+00 | 1.553570e+00 | 1.2e+00 | 2.6e+00 | 8.1e+01 | 5.71e-02 | 1.4e+01 | 1.7e+01 | 509 |
| fr | 2005_08 | 2a6q:A | 2.1 | 2.0 | 6.222773e+00 | 4.083615e+00 | 1.0e+01 | 2.3e+01 | 8.8e+01 | 4.68e+00 | 2.9e+01 | 3.7e+01 | 86 |
| fr | 2005_08 | 2a6q:E | 3.2 | 2.0 | 2.294560e+00 | 2.809449e+00 | 2.4e+00 | 7.1e+00 | 9.3e+01 | 7.09e+00 | 2.5e+01 | 3.1e+01 | 84 |
| fr | 2005_08 | 2a7y:A | 6.3 | 2.3 | 5.122728e+00 | -1.644751e+00 | 1.4e+01 | 2.2e+01 | 8.8e+01 | 1.17e+01 | 3.6e+01 | 5.5e+01 | 80 |
| fr | 2005_08 | THIS_month:psum | 4.2 | 2.8 | 4.3 | 7.1 | 16.7 | 27.1 | 89.3 | 8.2 | 37.6 | 45.2 | 161.5 |
| fr | 2006_11_16 | psum | 5.8 | 3.0 | 4.1 | 7.5 | 23.9 | 33.4 | 87.9 | 7.6 | 44.3 | 50.0 | 138.4 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |