| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2005_07 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2005_07 | THIS_month:psum | 2.7 | 2.0 | 24.2 | 9.5 | 15.3 | 22.1 | 50.2 | 7.0 | 28.6 | 31.6 | 115.8 |
| fr | 2005_07 | 1tqz:A | 2.1 | 1.2 | -9.543554e+00 | -3.768295e+00 | 0.0e+00 | 0.0e+00 | 4.8e+01 | 0.14 | 1.9e+01 | 2.0e+01 | 133 |
| fr | 2005_07 | 1vrq:D | 1.3 | 1.2 | -1.131104e+01 | -6.377657e+00 | 3.3e+00 | 5.5e+00 | 5.9e+01 | 1.9 | 2.0e+01 | 2.3e+01 | 91 |
| fr | 2005_07 | 1yzb:A | 1.2 | 1.6 | -1.704701e+01 | -2.724991e+00 | 1.6e+00 | 3.3e+00 | 1.9e+01 | 0.74 | 8.2e+00 | 1.3e+01 | 182 |
| fr | 2005_07 | 1z0j:B | 4.7 | 2.6 | -1.650811e+01 | 2.121072e+01 | 3.5e+01 | 5.1e+01 | 7.3e+01 | 5.9 | 5.9e+01 | 6.3e+01 | 51 |
| fr | 2005_07 | 1zcd:A | 2.0 | 2.6 | -1.607322e+01 | 1.655781e+00 | 5.3e-01 | 2.7e+00 | 1.0e+01 | 19 | 8.0e+00 | 8.8e+00 | 376 |
| fr | 2005_07 | 1zlh:B | 1.6 | 1.6 | -3.214737e+01 | -8.254054e+00 | 1.9e+01 | 2.3e+01 | 2.6e+01 | 11 | 1.9e+01 | 2.4e+01 | 74 |
| fr | 2005_07 | 1zo0:A | 1.6 | 1.6 | -6.169697e+00 | 3.984697e-01 | 8.7e+00 | 1.5e+01 | 7.9e+01 | 2.1 | 1.2e+01 | 1.8e+01 | 126 |
| fr | 2005_07 | 1zoy:D | 1.7 | 2.8 | -2.867497e+01 | -5.010823e+00 | 1.1e+01 | 1.6e+01 | 2.1e+01 | 17 | 1.6e+01 | 1.6e+01 | 102 |
| fr | 2005_07 | 1zpy:A | 0.3 | 1.6 | -2.106207e+01 | -6.851452e+00 | 1.1e+01 | 1.2e+01 | 3.3e+01 | 4.3 | 1.7e+01 | 2.0e+01 | 89 |
| fr | 2005_07 | 2a13:A | 1.5 | 0.7 | -9.815399e+00 | -1.870908e-01 | 2.0e+00 | 2.6e+00 | 4.1e+01 | 0.51 | 1.4e+01 | 1.7e+01 | 151 |
| fr | 2005_07 | 2a23:A | 2.2 | 2.0 | -1.908750e+01 | -7.318433e+00 | 6.1e+00 | 1.2e+01 | 3.9e+01 | 8.2 | 2.2e+01 | 2.4e+01 | 82 |
| fr | 2005_07 | 2ab9:A | 0.1 | 1.2 | -2.181429e+01 | -1.970227e+01 | 3.2e+00 | 1.9e+01 | 9.0e+01 | 19 | 4.8e+01 | 5.2e+01 | 31 |
| fr | 2005_07 | 2bho:A | 13.2 | 3.7 | 2.404852e+01 | 2.389457e+01 | 6.9e+01 | 7.4e+01 | 9.7e+01 | 0.08 | 7.9e+01 | 8.1e+01 | 110 |
| fr | 2005_07 | 2bjn:A | 7.1 | 3.9 | 2.453766e+01 | 9.644415e+00 | 1.8e+01 | 2.9e+01 | 4.0e+01 | 0.12 | 3.5e+01 | 3.6e+01 | 141 |
| fr | 2005_07 | 2bn5:A | 3.6 | 3.1 | -2.106207e+01 | 6.596841e-01 | 5.5e+01 | 7.9e+01 | 8.8e+01 | 7.6 | 6.4e+01 | 6.7e+01 | 33 |
| fr | 2005_07 | 2bw3:B | 0.5 | 1.6 | -1.796471e+01 | -2.469855e+00 | 2.4e+00 | 1.1e+01 | 4.1e+01 | 16 | 1.8e+01 | 2.3e+01 | 82 |
| fr | 2005_07 | THIS_month:psum | 2.7 | 2.0 | 24.2 | 9.5 | 15.3 | 22.1 | 50.2 | 7.0 | 28.6 | 31.6 | 115.8 |
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |