| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 665 |
| NWEEKS : | 300 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2005_07 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 5.8 | 3.0 | 4.1 | 7.5 | 23.9 | 33.4 | 87.9 | 7.6 | 44.3 | 50.0 | 138.4 |
| fr | 2005_07 | THIS_month:psum | 4.8 | 2.8 | 9.7 | 12.7 | 21.6 | 32.6 | 88.3 | 7.6 | 42.8 | 47.5 | 115.8 |
| fr | 2005_07 | 1tqz:A | 12.3 | 3.1 | 4.146201e+00 | 6.712425e+00 | 2.6e+01 | 3.8e+01 | 8.3e+01 | 5.83e+00 | 4.8e+01 | 5.9e+01 | 133 |
| fr | 2005_07 | 1vrq:D | 1.6 | 1.6 | -7.259979e+00 | 1.436011e+00 | 1.4e+01 | 2.1e+01 | 9.2e+01 | 4.91e+00 | 2.6e+01 | 3.5e+01 | 91 |
| fr | 2005_07 | 1yzb:A | 2.2 | 3.5 | 4.868377e+00 | -1.488184e+00 | 1.1e+00 | 6.6e+00 | 7.4e+01 | 7.18e-02 | 1.8e+01 | 2.0e+01 | 182 |
| fr | 2005_07 | 1z0j:B | 6.7 | 4.2 | -1.221600e+01 | 3.710557e+01 | 8.4e+01 | 8.4e+01 | 9.8e+01 | 8.78e+00 | 8.6e+01 | 8.6e+01 | 51 |
| fr | 2005_07 | 1zcd:A | 3.0 | 3.5 | 2.535616e-01 | 1.341145e+00 | 1.3e+00 | 2.1e+00 | 9.6e+01 | 8.01e-02 | 1.3e+01 | 1.5e+01 | 376 |
| fr | 2005_07 | 1zlh:B | 0.7 | 1.2 | -9.687074e+00 | -7.142131e+00 | 8.1e+00 | 1.6e+01 | 8.5e+01 | 5.45e+00 | 2.4e+01 | 3.6e+01 | 74 |
| fr | 2005_07 | 1zo0:A | 3.7 | 3.5 | -5.603670e+00 | 2.621971e+00 | 7.1e+00 | 1.4e+01 | 8.7e+01 | 2.47e+00 | 3.3e+01 | 3.6e+01 | 126 |
| fr | 2005_07 | 1zoy:D | 10.8 | 4.2 | 1.082620e+01 | 1.782529e+01 | 3.9e+01 | 5.5e+01 | 8.7e+01 | 6.92e-01 | 7.2e+01 | 7.5e+01 | 102 |
| fr | 2005_07 | 1zpy:A | 7.3 | 3.9 | 1.807166e+01 | 2.089927e+01 | 3.1e+01 | 4.9e+01 | 9.9e+01 | 4.30e+00 | 5.5e+01 | 5.6e+01 | 89 |
| fr | 2005_07 | 2a13:A | 7.3 | 2.8 | -5.569930e+00 | 1.154111e+01 | 5.3e+00 | 1.9e+01 | 7.2e+01 | 7.86e+00 | 5.5e+01 | 6.2e+01 | 151 |
| fr | 2005_07 | 2a23:A | 2.0 | 2.6 | -8.852174e+00 | -2.797479e+00 | 3.7e+00 | 1.2e+01 | 8.4e+01 | 4.88e+00 | 2.8e+01 | 3.4e+01 | 82 |
| fr | 2005_07 | 2ab9:A | 1.2 | 2.0 | -2.035782e+01 | -1.940811e+01 | 1.9e+01 | 4.8e+01 | 9.7e+01 | 1.67e+01 | 4.2e+01 | 4.8e+01 | 31 |
| fr | 2005_07 | 2bho:A | 13.9 | 3.7 | 2.268881e+01 | 2.383384e+01 | 6.9e+01 | 7.9e+01 | 9.9e+01 | 1.24e-02 | 8.1e+01 | 8.5e+01 | 110 |
| fr | 2005_07 | 2bjn:A | 1.7 | 2.0 | 7.567718e+00 | 4.115516e+00 | 1.4e+00 | 9.2e+00 | 7.7e+01 | 1.76e+00 | 2.5e+01 | 3.0e+01 | 141 |
| fr | 2005_07 | 2bn5:A | 1.8 | 2.3 | -2.036000e+01 | -1.420831e+01 | 2.7e+01 | 4.8e+01 | 9.1e+01 | 4.53e+01 | 5.2e+01 | 5.2e+01 | 33 |
| fr | 2005_07 | 2bw3:B | 1.3 | 1.6 | -8.036842e+00 | -1.207742e+00 | 9.8e+00 | 2.1e+01 | 9.3e+01 | 1.34e+01 | 2.7e+01 | 3.2e+01 | 82 |
| fr | 2005_07 | THIS_month:psum | 4.8 | 2.8 | 9.7 | 12.7 | 21.6 | 32.6 | 88.3 | 7.6 | 42.8 | 47.5 | 115.8 |
| fr | 2006_11_16 | psum | 5.8 | 3.0 | 4.1 | 7.5 | 23.9 | 33.4 | 87.9 | 7.6 | 44.3 | 50.0 | 138.4 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |