| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2005_06 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2005_06 | THIS_month:psum | 2.0 | 2.3 | 6.2 | 5.8 | 8.9 | 51.1 | 7.1 | 22.9 | 27.8 | 119.7 | |
| fr | 2005_06 | 1wz3:A | 6.6 | 4.6 | -7.271428e+00 | 1.623207e+01 | 4.8e+00 | 1.2e+01 | 1.0e+02 | 0.07 | 5.6e+01 | 6.0e+01 | 84 |
| fr | 2005_06 | 1x0p:A | 3.6 | 2.6 | -7.271359e+00 | 1.855420e+00 | 2.8e+00 | 8.5e+00 | 5.9e+01 | 1.4 | 2.5e+01 | 3.3e+01 | 142 |
| fr | 2005_06 | 1xk5:A | 1.1 | 1.2 | -7.271164e+00 | -1.009890e+00 | 2.9e+00 | 3.4e+00 | 4.1e+01 | 2.4 | 1.2e+01 | 1.7e+01 | 204 |
| fr | 2005_06 | 1xwr:A | 2.0 | 2.6 | -1.454285e+01 | -7.711538e+00 | 2.4e+01 | 2.5e+01 | 5.3e+01 | 2.1 | 2.5e+01 | 2.5e+01 | 79 |
| fr | 2005_06 | 1y96:A | 1.3 | 1.6 | -1.650811e+01 | -6.356647e+00 | 5.8e+00 | 9.3e+00 | 4.3e+01 | 14 | 2.2e+01 | 2.9e+01 | 86 |
| fr | 2005_06 | 1z1a:A | 1.6 | 1.6 | -1.388182e+01 | -4.678061e+00 | 3.5e+00 | 6.1e+00 | 3.9e+01 | 3.3 | 1.6e+01 | 2.3e+01 | 114 |
| fr | 2005_06 | 1z21:A | 0.8 | 2.3 | -1.190356e+01 | 5.132627e-01 | 4.2e+00 | 9.4e+00 | 5.3e+01 | 1.2 | 2.9e+01 | 3.2e+01 | 96 |
| fr | 2005_06 | 1zhq:A | 0.9 | 2.0 | -1.106065e+01 | -4.365954e+00 | 0.0e+00 | 0.0e+00 | 4.9e+01 | 1.6 | 1.3e+01 | 1.9e+01 | 113 |
| fr | 2005_06 | 1zxu:A | 0.8 | 2.3 | -1.650811e+01 | -2.865861e+00 | 5.0e+00 | 6.9e+00 | 2.3e+01 | 38 | 8.8e+00 | 1.3e+01 | 160 |
| fr | 2005_06 | THIS_month:psum | 2.0 | 2.3 | 6.2 | 5.8 | 8.9 | 51.1 | 7.1 | 22.9 | 27.8 | 119.7 | |
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |