| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2005_05 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2005_05 | THIS_month:psum | 2.2 | 2.1 | 15.1 | 6.0 | 12.6 | 19.2 | 50.8 | 11.5 | 23.3 | 26 | 117.5 |
| fr | 2005_05 | 1q01:A | 0.3 | 2.0 | -2.262222e+01 | -1.605895e+01 | 5.3e+00 | 1.3e+01 | 7.1e+01 | 37 | 3.4e+01 | 3.9e+01 | 38 |
| fr | 2005_05 | 1t98:A | 2.3 | 3.1 | -8.353989e+00 | 1.686853e+00 | 1.1e+00 | 3.1e+00 | 2.8e+01 | 5.7 | 1.6e+01 | 1.7e+01 | 261 |
| fr | 2005_05 | 1y5o:A | 7.2 | 3.1 | 1.517086e+01 | 1.050311e+01 | 5.2e+01 | 6.3e+01 | 7.2e+01 | 0.28 | 5.8e+01 | 6.3e+01 | 115 |
| fr | 2005_05 | 1yhn:B | 2.0 | 2.8 | -1.566154e+01 | -5.183098e+00 | 7.7e+00 | 1.7e+01 | 6.0e+01 | 1.2 | 3.4e+01 | 3.4e+01 | 65 |
| fr | 2005_05 | 1ylx:A | 1.3 | 1.6 | -1.527000e+01 | -5.584198e+00 | 2.1e+00 | 3.2e+00 | 4.3e+01 | 1.3 | 1.6e+01 | 1.9e+01 | 94 |
| fr | 2005_05 | 1yp8:A | 0.5 | 0 | -2.908571e+01 | -1.850909e+01 | 2.1e+01 | 3.3e+01 | 6.4e+01 | 32 | 0.0e+00 | 0.0e+00 | 33 |
| fr | 2005_05 | 1z67:A | 2.9 | 3.5 | -1.387948e+01 | -1.513776e+00 | 1.1e+01 | 2.0e+01 | 3.5e+01 | 5.3 | 1.8e+01 | 2.1e+01 | 126 |
| fr | 2005_05 | 1zhh:B | 1.3 | 0.7 | -8.725714e+00 | -2.806227e+00 | 9.6e-01 | 1.4e+00 | 3.4e+01 | 10 | 1.1e+01 | 1.5e+01 | 208 |
| fr | 2005_05 | THIS_month:psum | 2.2 | 2.1 | 15.1 | 6.0 | 12.6 | 19.2 | 50.8 | 11.5 | 23.3 | 26 | 117.5 |
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |