| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2005_04 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2005_04 | THIS_month:psum | 3.7 | 2.4 | 22.9 | 12.0 | 17.5 | 26.5 | 52.6 | 8.2 | 30.2 | 34.1 | 105 |
| fr | 2005_04 | 1szl:A | 0.5 | 2.0 | -1.650811e+01 | -9.866462e+00 | 6.6e+00 | 1.8e+01 | 6.1e+01 | 19 | 2.6e+01 | 2.8e+01 | 61 |
| fr | 2005_04 | 1y74:A | 1.8 | 3.1 | -1.169003e+01 | -1.783636e+00 | 1.8e+01 | 3.3e+01 | 9.1e+01 | 9.1 | 4.0e+01 | 4.4e+01 | 57 |
| fr | 2005_04 | 1y74:B | 1.6 | 2.3 | -3.393333e+01 | -1.221600e+01 | 2.2e+01 | 2.8e+01 | 3.6e+01 | 22 | 2.8e+01 | 2.8e+01 | 50 |
| fr | 2005_04 | 1y9l:A | 2.5 | 3.1 | -1.152453e+01 | 1.712124e+00 | 1.5e+01 | 1.8e+01 | 4.8e+01 | 2.8 | 1.0e+01 | 2.8e+01 | 110 |
| fr | 2005_04 | 1ywy:A | 2.3 | 1.6 | -1.035225e+01 | -6.617784e+00 | 1.4e+01 | 2.3e+01 | 8.0e+01 | 2.4 | 3.5e+01 | 4.6e+01 | 74 |
| fr | 2005_04 | 1z0p:A | 6.1 | 3.1 | 2.296404e+01 | 1.552193e+01 | 1.5e+01 | 3.4e+01 | 5.6e+01 | 10 | 4.5e+01 | 4.5e+01 | 73 |
| fr | 2005_04 | 1z23:A | 2.0 | 0 | -2.908571e+01 | -2.553909e+00 | 9.8e+00 | 1.0e+01 | 1.3e+01 | 11 | 0.0e+00 | 0.0e+00 | 163 |
| fr | 2005_04 | 1z2n:X | 11.7 | 3.9 | -5.458787e+00 | 7.315090e+00 | 2.3e+01 | 2.5e+01 | 2.8e+01 | 0.02 | 2.6e+01 | 2.7e+01 | 311 |
| fr | 2005_04 | 1z61:A | 2.4 | 1.6 | -2.181429e+01 | -8.229425e+00 | 1.0e+01 | 1.9e+01 | 4.0e+01 | 6.4 | 2.7e+01 | 3.0e+01 | 70 |
| fr | 2005_04 | 2blf:B | 6.5 | 4.2 | -1.035254e+01 | 2.347470e+01 | 4.2e+01 | 5.7e+01 | 7.3e+01 | 0.15 | 6.5e+01 | 6.5e+01 | 81 |
| fr | 2005_04 | THIS_month:psum | 3.7 | 2.4 | 22.9 | 12.0 | 17.5 | 26.5 | 52.6 | 8.2 | 30.2 | 34.1 | 105 |
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |