| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2005_03 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2005_03 | THIS_month:psum | 1.9 | 2.0 | 18.6 | 10.2 | 18.9 | 23.8 | 48 | 24.7 | 25.4 | 27.6 | 104.8 |
| fr | 2005_03 | 1s6x:A | 3.7 | 3.3 | 2.820769e+01 | 1.984148e+01 | 8.2e+01 | 8.2e+01 | 8.2e+01 | 1.6 | 7.9e+01 | 8.2e+01 | 34 |
| fr | 2005_03 | 1skh:A | 0.0 | 0 | -5.552727e+01 | -2.036000e+01 | 6.7e+00 | 2.7e+01 | 3.7e+01 | 108 | 0.0e+00 | 0.0e+00 | 30 |
| fr | 2005_03 | 1w1n:A | 1.1 | 0 | -3.054000e+01 | -1.850909e+01 | 3.6e+01 | 4.2e+01 | 6.1e+01 | 40 | 0.0e+00 | 0.0e+00 | 33 |
| fr | 2005_03 | 1wmi:A | 1.3 | 2.6 | 7.362256e+00 | -6.398410e+00 | 1.4e+01 | 1.5e+01 | 5.3e+01 | 26 | 2.6e+01 | 3.4e+01 | 88 |
| fr | 2005_03 | 1wqk:A | 5.4 | 3.9 | 2.633799e+01 | 2.125109e+01 | 8.6e+01 | 8.8e+01 | 8.8e+01 | 31 | 8.3e+01 | 8.6e+01 | 42 |
| fr | 2005_03 | 1xhh:A | 1.0 | 0 | -3.054000e+01 | -6.708185e+00 | 2.2e+00 | 5.5e+00 | 2.2e+01 | 2.1 | 0.0e+00 | 0.0e+00 | 91 |
| fr | 2005_03 | 1xl3:A | 1.8 | 2.3 | -2.181429e+01 | -4.647471e-01 | 3.7e+00 | 6.8e+00 | 1.5e+01 | 6.5 | 1.0e+01 | 1.2e+01 | 191 |
| fr | 2005_03 | 1xl3:C | 1.1 | 0 | -1.970323e+01 | -6.939152e+00 | 8.0e+00 | 1.4e+01 | 3.5e+01 | 4.0 | 1.9e+01 | 2.2e+01 | 88 |
| fr | 2005_03 | 1xrd:A | 3.2 | 3.5 | 2.215082e+01 | 1.439512e+01 | 4.2e+01 | 5.4e+01 | 6.2e+01 | 163 | 5.2e+01 | 5.2e+01 | 52 |
| fr | 2005_03 | 1y66:A | 1.3 | 2.6 | -1.848059e+01 | -3.896130e+00 | 2.0e+00 | 6.0e+00 | 6.6e+01 | 1.7 | 3.6e+01 | 3.6e+01 | 50 |
| fr | 2005_03 | 1y6u:A | 1.4 | 2.0 | -1.105946e+01 | -9.674728e+00 | 5.1e+00 | 1.5e+01 | 9.3e+01 | 13 | 3.4e+01 | 3.9e+01 | 59 |
| fr | 2005_03 | 1ygm:A | 1.2 | 2.6 | -8.839762e+00 | -2.754824e+00 | 7.1e+00 | 8.9e+00 | 6.2e+01 | 0.40 | 1.9e+01 | 2.1e+01 | 112 |
| fr | 2005_03 | 1yle:A | 2.7 | 2.3 | -8.722848e+00 | -1.155653e+00 | 7.1e+00 | 7.1e+00 | 2.2e+01 | 1.9 | 6.8e+00 | 8.3e+00 | 325 |
| fr | 2005_03 | 1ylm:A | 1.6 | 3.1 | 9.295633e+00 | 1.288100e+00 | 8.6e+00 | 1.4e+01 | 2.2e+01 | 7.2 | 1.9e+01 | 1.9e+01 | 139 |
| fr | 2005_03 | 1yln:A | 3.2 | 2.3 | -5.485460e+00 | 3.391636e+00 | 1.8e+00 | 4.9e+00 | 2.8e+01 | 1.8 | 1.4e+01 | 1.9e+01 | 225 |
| fr | 2005_03 | 1yn5:A | 1.9 | 2.6 | -2.261783e+01 | -4.146678e-02 | 9.7e+00 | 1.2e+01 | 2.6e+01 | 12 | 2.0e+01 | 2.3e+01 | 103 |
| fr | 2005_03 | 1yzs:A | 1.9 | 2.0 | -1.197647e+01 | 1.472426e+00 | 0.0e+00 | 3.3e+00 | 4.2e+01 | 0.60 | 1.5e+01 | 1.7e+01 | 121 |
| fr | 2005_03 | THIS_month:psum | 1.9 | 2.0 | 18.6 | 10.2 | 18.9 | 23.8 | 48 | 24.7 | 25.4 | 27.6 | 104.8 |
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |