| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 665 |
| NWEEKS : | 300 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2005_03 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 5.8 | 3.0 | 4.1 | 7.5 | 23.9 | 33.4 | 87.9 | 7.6 | 44.3 | 50.0 | 138.4 |
| fr | 2005_03 | THIS_month:psum | 5.1 | 3.0 | 18.5 | 13.3 | 31.0 | 38.7 | 90.4 | 19.5 | 49.5 | 54.5 | 104.8 |
| fr | 2005_03 | 1s6x:A | 4.8 | 3.7 | 2.624121e+01 | 2.624121e+01 | 9.1e+01 | 9.7e+01 | 1.0e+02 | 8.78e-01 | 9.4e+01 | 9.4e+01 | 34 |
| fr | 2005_03 | 1skh:A | 3.7 | 3.3 | 2.170669e+01 | 2.025890e+01 | 7.0e+01 | 9.0e+01 | 9.3e+01 | 7.36e+01 | 7.7e+01 | 8.7e+01 | 30 |
| fr | 2005_03 | 1w1n:A | 3.0 | 3.1 | 2.977226e+01 | 2.345691e+01 | 6.7e+01 | 7.0e+01 | 8.5e+01 | 1.91e+02 | 6.4e+01 | 7.3e+01 | 33 |
| fr | 2005_03 | 1wmi:A | 3.5 | 2.6 | -7.987535e+00 | -8.454292e-01 | 8.0e+00 | 1.5e+01 | 8.5e+01 | 8.61e+00 | 3.2e+01 | 3.5e+01 | 88 |
| fr | 2005_03 | 1wqk:A | 6.1 | 4.1 | 1.837433e+01 | 1.793684e+01 | 9.0e+01 | 9.5e+01 | 9.8e+01 | 7.58e+00 | 9.3e+01 | 9.5e+01 | 42 |
| fr | 2005_03 | 1xhh:A | 4.6 | 2.6 | -3.274165e+00 | -1.225725e+00 | 2.1e+01 | 2.7e+01 | 8.2e+01 | 3.20e+00 | 2.5e+01 | 3.5e+01 | 91 |
| fr | 2005_03 | 1xl3:A | 3.9 | 2.8 | -9.192365e-01 | 7.497023e+00 | 2.1e+00 | 3.7e+00 | 8.8e+01 | 4.66e+00 | 2.4e+01 | 2.6e+01 | 191 |
| fr | 2005_03 | 1xl3:C | 2.3 | 2.3 | -3.212852e+00 | 1.051916e+01 | 1.2e+01 | 1.9e+01 | 9.8e+01 | 1.60e+01 | 4.1e+01 | 4.5e+01 | 88 |
| fr | 2005_03 | 1xrd:A | 4.8 | 3.9 | 1.586388e+01 | 1.281313e+01 | 2.9e+01 | 4.8e+01 | 9.8e+01 | 4.42e-05 | 6.2e+01 | 6.7e+01 | 52 |
| fr | 2005_03 | 1y66:A | 1.0 | 2.8 | -1.125607e+01 | -1.019471e+01 | 0.0e+00 | 0.0e+00 | 1.0e+02 | 6.09e+00 | 3.4e+01 | 3.4e+01 | 50 |
| fr | 2005_03 | 1y6u:A | 5.4 | 3.1 | -1.033767e+01 | 3.832750e+00 | 2.5e+01 | 3.9e+01 | 1.0e+02 | 1.36e+01 | 5.3e+01 | 6.1e+01 | 59 |
| fr | 2005_03 | 1ygm:A | 2.4 | 3.1 | -3.242025e+00 | 3.627852e-01 | 4.5e+00 | 1.2e+01 | 8.2e+01 | 4.12e+00 | 2.8e+01 | 2.9e+01 | 112 |
| fr | 2005_03 | 1yle:A | 10.2 | 3.7 | 1.149493e+01 | 6.278709e+00 | 6.2e+00 | 1.0e+01 | 7.3e+01 | 6.75e-01 | 3.5e+01 | 3.9e+01 | 325 |
| fr | 2005_03 | 1ylm:A | 12.0 | 2.8 | 6.694493e+00 | 1.123946e+01 | 2.2e+01 | 3.7e+01 | 8.9e+01 | 9.66e-01 | 6.0e+01 | 6.5e+01 | 139 |
| fr | 2005_03 | 1yln:A | 2.5 | 2.0 | -3.027506e+00 | -1.787432e-02 | 2.7e+00 | 4.0e+00 | 8.9e+01 | 7.08e-01 | 1.7e+01 | 2.6e+01 | 225 |
| fr | 2005_03 | 1yn5:A | 14.1 | 4.6 | -6.047488e+00 | 1.969359e+01 | 7.4e+01 | 8.6e+01 | 9.8e+01 | 1.64e-02 | 8.1e+01 | 8.7e+01 | 103 |
| fr | 2005_03 | 1yzs:A | 3.3 | 1.6 | -6.296203e+00 | -3.954649e+00 | 3.3e+00 | 5.8e+00 | 8.0e+01 | 1.28e+00 | 2.3e+01 | 3.0e+01 | 121 |
| fr | 2005_03 | THIS_month:psum | 5.1 | 3.0 | 18.5 | 13.3 | 31.0 | 38.7 | 90.4 | 19.5 | 49.5 | 54.5 | 104.8 |
| fr | 2006_11_16 | psum | 5.8 | 3.0 | 4.1 | 7.5 | 23.9 | 33.4 | 87.9 | 7.6 | 44.3 | 50.0 | 138.4 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |