| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2005_02 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2005_02 | THIS_month:psum | 2.4 | 1.7 | 14.1 | 15.4 | 19.6 | 34.8 | 2.2 | 17.1 | 19.5 | 118.3 | |
| fr | 2005_02 | 1u57:A | 0.6 | 0 | -4.698462e+01 | -1.272500e+01 | 2.3e+01 | 2.7e+01 | 2.7e+01 | 0.34 | 0.0e+00 | 0.0e+00 | 48 |
| fr | 2005_02 | 1wnh:A | 3.1 | 3.1 | -1.053096e+01 | 3.180606e+00 | 9.1e-01 | 1.8e+00 | 2.6e+01 | 0.39 | 1.2e+01 | 1.5e+01 | 220 |
| fr | 2005_02 | 1xsf:A | 2.7 | 0.7 | -5.265904e+00 | -5.573938e+00 | 1.7e+01 | 1.8e+01 | 2.1e+01 | 2.9 | 7.4e+00 | 1.0e+01 | 108 |
| fr | 2005_02 | 1ycy:A | 5.7 | 3.7 | -1.388180e+01 | 2.521717e+01 | 4.7e+01 | 6.3e+01 | 7.3e+01 | 0.30 | 6.0e+01 | 6.2e+01 | 60 |
| fr | 2005_02 | 1ydu:A | 1.0 | 1.2 | -1.357325e+01 | -2.633561e+00 | 1.2e+00 | 3.5e+00 | 2.6e+01 | 5.0 | 9.4e+00 | 1.1e+01 | 170 |
| fr | 2005_02 | 1ygt:A | 1.4 | 2.0 | -1.552391e+01 | -1.619630e+00 | 3.8e+00 | 4.8e+00 | 3.6e+01 | 4.4 | 1.4e+01 | 1.9e+01 | 104 |
| fr | 2005_02 | THIS_month:psum | 2.4 | 1.7 | 14.1 | 15.4 | 19.6 | 34.8 | 2.2 | 17.1 | 19.5 | 118.3 | |
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |