| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2005_01 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2005_01 | THIS_month:psum | 1.7 | 1.7 | 2.9 | 9.7 | 16.9 | 44 | 12.6 | 17.7 | 22.1 | 103 | |
| fr | 2005_01 | 1s3a:A | 3.4 | 2.0 | -1.053051e+01 | -4.793341e+00 | 3.5e+00 | 1.1e+01 | 6.8e+01 | 1.8 | 2.1e+01 | 2.8e+01 | 85 |
| fr | 2005_01 | 1tgq:A | 1.7 | 2.0 | -1.088049e+01 | -5.297133e+00 | 2.1e+00 | 7.3e+00 | 4.7e+01 | 6.5 | 2.0e+01 | 3.0e+01 | 96 |
| fr | 2005_01 | 1tot:A | 1.1 | 1.6 | -2.650556e+01 | -9.113301e+00 | 1.5e+01 | 2.5e+01 | 4.4e+01 | 4.3 | 3.3e+01 | 3.8e+01 | 52 |
| fr | 2005_01 | 1tv0:A | 0.1 | 0 | -4.072000e+01 | -1.908750e+01 | 3.1e+01 | 3.8e+01 | 4.7e+01 | 72 | 0.0e+00 | 0.0e+00 | 32 |
| fr | 2005_01 | 1w94:A | 2.3 | 2.3 | -1.745143e+01 | -2.549883e+00 | 5.4e+00 | 1.0e+01 | 2.4e+01 | 4.6 | 1.2e+01 | 1.4e+01 | 148 |
| fr | 2005_01 | 1y12:A | 1.2 | 0.7 | -1.272500e+01 | -3.725263e+00 | 1.9e+00 | 2.6e+00 | 3.1e+01 | 4.5 | 1.2e+01 | 1.5e+01 | 154 |
| fr | 2005_01 | 1y5y:A | 2.0 | 2.6 | -1.388182e+01 | -1.089019e+00 | 6.9e+00 | 1.1e+01 | 2.8e+01 | 6.9 | 1.7e+01 | 2.1e+01 | 159 |
| fr | 2005_01 | 1y7q:A | 2.5 | 3.1 | -7.314643e+00 | 2.934463e+00 | 1.2e+01 | 3.1e+01 | 6.3e+01 | 0.32 | 2.7e+01 | 3.1e+01 | 98 |
| fr | 2005_01 | THIS_month:psum | 1.7 | 1.7 | 2.9 | 9.7 | 16.9 | 44 | 12.6 | 17.7 | 22.1 | 103 | |
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |