| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2004_12 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2004_12 | THIS_month:psum | 3.4 | 2.2 | 24.7 | 3.0 | 11.6 | 17.6 | 51.2 | 30.6 | 23 | 26.6 | 123.8 |
| fr | 2004_12 | 1rq6:A | 4.0 | 2.8 | -1.516816e+01 | 3.278237e+00 | 1.8e+01 | 3.1e+01 | 5.2e+01 | 49 | 4.5e+01 | 4.5e+01 | 62 |
| fr | 2004_12 | 1t6s:A | 2.3 | 2.8 | 3.753338e+01 | -2.877684e+00 | 1.2e+01 | 1.3e+01 | 2.6e+01 | 106 | 1.3e+01 | 1.5e+01 | 162 |
| fr | 2004_12 | 1t71:A | 12.6 | 3.3 | 1.192473e+01 | 4.240590e+00 | 1.5e+01 | 1.9e+01 | 3.5e+01 | 0.49 | 2.4e+01 | 2.7e+01 | 281 |
| fr | 2004_12 | 1v66:A | 1.9 | 2.6 | -1.993798e+00 | 4.016189e+00 | 1.2e+01 | 2.2e+01 | 9.4e+01 | 20 | 4.6e+01 | 5.2e+01 | 65 |
| fr | 2004_12 | 1wpb:A | 1.8 | 2.3 | -9.883639e+00 | -1.351354e+00 | 7.1e+00 | 7.7e+00 | 3.5e+01 | 4.4 | 1.4e+01 | 1.5e+01 | 168 |
| fr | 2004_12 | 1x9b:A | 2.2 | 2.6 | -1.566131e+01 | -3.993592e+00 | 1.3e+01 | 3.0e+01 | 7.4e+01 | 95 | 3.2e+01 | 4.0e+01 | 53 |
| fr | 2004_12 | 1xn7:A | 0.5 | 1.2 | -1.105551e+01 | -7.764969e+00 | 1.0e+01 | 1.5e+01 | 7.1e+01 | 3.7 | 1.5e+01 | 1.8e+01 | 78 |
| fr | 2004_12 | 1xne:A | 3.4 | 1.6 | -7.158890e+00 | -1.567944e+00 | 9.7e+00 | 1.3e+01 | 7.5e+01 | 6.4 | 2.0e+01 | 3.0e+01 | 113 |
| fr | 2004_12 | 1y0u:A | 0.8 | 0 | -4.362857e+01 | -7.102326e+00 | 1.6e+01 | 1.6e+01 | 1.6e+01 | 21 | 0.0e+00 | 0.0e+00 | 86 |
| fr | 2004_12 | 2bem:A | 4.6 | 3.1 | -1.053100e+01 | 8.177498e-01 | 4.1e+00 | 1.0e+01 | 3.4e+01 | 1.0 | 2.1e+01 | 2.4e+01 | 170 |
| fr | 2004_12 | THIS_month:psum | 3.4 | 2.2 | 24.7 | 3.0 | 11.6 | 17.6 | 51.2 | 30.6 | 23 | 26.6 | 123.8 |
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |