| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2004_11 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2004_11 | THIS_month:psum | 2.6 | 2.2 | 19.4 | 9.3 | 18.0 | 24.3 | 57.9 | 5.2 | 30 | 34.0 | 90.6 |
| fr | 2004_11 | 1rzn:A | 1.4 | 1.6 | -8.982353e+00 | 4.102092e-01 | 2.7e+00 | 3.3e+00 | 4.5e+01 | 1.7 | 1.6e+01 | 2.1e+01 | 150 |
| fr | 2004_11 | 1t0f:C | 0.3 | 2.0 | -1.420465e+01 | -1.222704e+01 | 8.2e+00 | 1.4e+01 | 8.8e+01 | 6.3 | 3.3e+01 | 3.7e+01 | 49 |
| fr | 2004_11 | 1t3w:A | 2.4 | 2.6 | -6.108000e+00 | 5.447896e+00 | 1.5e+01 | 1.5e+01 | 7.6e+01 | 1.4 | 2.8e+01 | 3.0e+01 | 131 |
| fr | 2004_11 | 1t5q:A | 3.8 | 3.3 | 1.509874e+01 | 1.395132e+01 | 8.0e+01 | 9.0e+01 | 1.0e+02 | 3.4 | 8.7e+01 | 9.0e+01 | 30 |
| fr | 2004_11 | 1usd:A | 3.3 | 4.1 | -1.527000e+01 | 3.018521e+01 | 2.0e+01 | 5.6e+01 | 9.8e+01 | 0.75 | 6.3e+01 | 7.1e+01 | 41 |
| fr | 2004_11 | 1w8x:N | 0.3 | 0.0 | -1.420465e+01 | -5.265222e+00 | 8.8e-01 | 1.8e+00 | 3.8e+01 | 0.45 | 1.5e+01 | 1.8e+01 | 114 |
| fr | 2004_11 | 1weq:A | 4.8 | 2.8 | -1.541085e+01 | -6.302931e+00 | 8.2e+00 | 1.6e+01 | 4.6e+01 | 3.1 | 2.9e+01 | 3.8e+01 | 85 |
| fr | 2004_11 | 1wgs:A | 6.4 | 4.1 | 2.811135e+01 | 7.827664e+00 | 2.9e+01 | 2.9e+01 | 3.9e+01 | 0.01 | 3.1e+01 | 3.4e+01 | 133 |
| fr | 2004_11 | 1wgx:A | 5.9 | 3.3 | 2.226412e+01 | 1.023544e+01 | 4.4e+01 | 5.1e+01 | 7.9e+01 | 0.11 | 5.2e+01 | 5.5e+01 | 73 |
| fr | 2004_11 | 1wh6:A | 3.0 | 3.1 | 2.224420e+01 | 5.726228e+00 | 2.1e+01 | 2.4e+01 | 2.6e+01 | 0.37 | 2.4e+01 | 2.4e+01 | 101 |
| fr | 2004_11 | 1whz:A | 1.8 | 0 | -3.214737e+01 | -9.116418e+00 | 2.5e+01 | 2.8e+01 | 2.8e+01 | 1.2 | 0.0e+00 | 0.0e+00 | 67 |
| fr | 2004_11 | 1wij:A | 1.9 | 2.0 | -1.745143e+01 | -1.861532e+00 | 5.5e+00 | 1.1e+01 | 2.8e+01 | 0.15 | 1.3e+01 | 1.6e+01 | 127 |
| fr | 2004_11 | 1wix:A | 4.2 | 2.0 | 2.409782e+01 | -1.586735e+00 | 1.8e+01 | 1.9e+01 | 5.4e+01 | 1.7 | 1.3e+01 | 2.1e+01 | 164 |
| fr | 2004_11 | 1wj2:A | 1.2 | 2.0 | -1.566154e+01 | -6.901035e+00 | 5.6e+00 | 1.4e+01 | 5.5e+01 | 6.0 | 3.0e+01 | 3.2e+01 | 71 |
| fr | 2004_11 | 1wjv:A | 2.7 | 2.0 | 4.834361e+00 | -6.243543e+00 | 2.5e+00 | 7.6e+00 | 5.6e+01 | 1.9 | 2.7e+01 | 3.5e+01 | 79 |
| fr | 2004_11 | 1wk2:A | 0.3 | 1.6 | -2.262222e+01 | -7.448102e+00 | 0.0e+00 | 2.4e+00 | 3.3e+01 | 2.3 | 1.7e+01 | 2.1e+01 | 82 |
| fr | 2004_11 | 1xg8:A | 4.4 | 3.3 | -7.448688e+00 | 9.050576e-01 | 2.3e+01 | 3.0e+01 | 7.6e+01 | 0.47 | 2.9e+01 | 3.1e+01 | 108 |
| fr | 2004_11 | 1xu1:R | 1.1 | 1.6 | -2.181429e+01 | -1.607364e+01 | 2.6e+01 | 3.4e+01 | 7.4e+01 | 63 | 3.9e+01 | 4.7e+01 | 38 |
| fr | 2004_11 | 1xu6:A | 1.6 | 2.0 | -1.221600e+01 | -6.007003e+00 | 7.5e+00 | 1.6e+01 | 6.2e+01 | 4.7 | 2.4e+01 | 2.6e+01 | 80 |
| fr | 2004_11 | THIS_month:psum | 2.6 | 2.2 | 19.4 | 9.3 | 18.0 | 24.3 | 57.9 | 5.2 | 30 | 34.0 | 90.6 |
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |