| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 665 |
| NWEEKS : | 300 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2004_11 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 5.8 | 3.0 | 4.1 | 7.5 | 23.9 | 33.4 | 87.9 | 7.6 | 44.3 | 50.0 | 138.4 |
| fr | 2004_11 | THIS_month:psum | 5.1 | 2.9 | 15.0 | 10.7 | 37.8 | 48.2 | 94 | 9.0 | 55.2 | 60.2 | 76.1 |
| fr | 2004_11 | 1rzn:A | 11.8 | 2.6 | -2.383018e+00 | 8.372751e+00 | 2.4e+01 | 4.5e+01 | 8.4e+01 | 1.96e-01 | 5.7e+01 | 6.5e+01 | 150 |
| fr | 2004_11 | 1t0f:C | 2.0 | 2.6 | -1.299574e+01 | -8.352371e+00 | 2.0e+01 | 3.1e+01 | 9.6e+01 | 1.62e+01 | 3.5e+01 | 4.1e+01 | 49 |
| fr | 2004_11 | 1t5q:A | 3.9 | 3.3 | 1.509874e+01 | 1.395132e+01 | 8.3e+01 | 9.3e+01 | 1.0e+02 | 7.38e-01 | 8.7e+01 | 9.0e+01 | 30 |
| fr | 2004_11 | 1usd:A | 4.5 | 3.7 | -1.454286e+01 | 1.926939e+01 | 5.9e+01 | 7.3e+01 | 1.0e+02 | 2.74e+01 | 5.9e+01 | 5.9e+01 | 41 |
| fr | 2004_11 | 1w8x:N | 4.4 | 2.8 | -5.811477e+00 | 7.537940e-02 | 4.4e+00 | 1.2e+01 | 9.2e+01 | 9.59e+00 | 3.5e+01 | 4.5e+01 | 114 |
| fr | 2004_11 | 1w8x:P | 0.9 | 2.0 | -8.144000e+00 | -5.546839e+00 | 0.0e+00 | 1.3e+00 | 9.5e+01 | 5.59e+00 | 2.2e+01 | 2.9e+01 | 79 |
| fr | 2004_11 | 1xg8:A | 9.1 | 2.8 | -6.090617e+00 | 1.070737e+01 | 3.0e+01 | 4.7e+01 | 9.3e+01 | 3.58e-01 | 6.3e+01 | 6.9e+01 | 108 |
| fr | 2004_11 | 1xu1:R | 4.4 | 3.7 | -1.745143e+01 | 1.208907e+01 | 8.2e+01 | 8.4e+01 | 9.2e+01 | 1.22e+01 | 8.4e+01 | 8.4e+01 | 38 |
| fr | 2004_11 | THIS_month:psum | 5.1 | 2.9 | 15.0 | 10.7 | 37.8 | 48.2 | 94 | 9.0 | 55.2 | 60.2 | 76.1 |
| fr | 2006_11_16 | psum | 5.8 | 3.0 | 4.1 | 7.5 | 23.9 | 33.4 | 87.9 | 7.6 | 44.3 | 50.0 | 138.4 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |