| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 665 |
| NWEEKS : | 300 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2004_10 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 5.8 | 3.0 | 4.1 | 7.5 | 23.9 | 33.4 | 87.9 | 7.6 | 44.3 | 50.0 | 138.4 |
| fr | 2004_10 | THIS_month:psum | 5.7 | 3 | 10.2 | 8.0 | 24.1 | 33.3 | 90.9 | 3.8 | 42.4 | 48.0 | 97.7 |
| fr | 2004_10 | 1r5s:A | 0.8 | 2.3 | -5.043042e+00 | -4.072983e+00 | 2.3e+00 | 4.5e+00 | 9.2e+01 | 3.61e+00 | 1.2e+01 | 1.8e+01 | 132 |
| fr | 2004_10 | 1u5m:A | 6.2 | 3.5 | 1.430628e+01 | 7.566508e+00 | 4.5e+01 | 4.9e+01 | 8.9e+01 | 2.45e+00 | 4.9e+01 | 5.3e+01 | 73 |
| fr | 2004_10 | 1u84:A | 3.8 | 3.3 | -4.858263e+00 | 1.146469e+01 | 9.9e+00 | 2.3e+01 | 1.0e+02 | 3.20e+00 | 4.4e+01 | 4.3e+01 | 81 |
| fr | 2004_10 | 1u96:A | 5.8 | 3.5 | 8.307832e+00 | 8.513483e+00 | 2.5e+01 | 3.9e+01 | 8.7e+01 | 7.32e+00 | 4.8e+01 | 5.2e+01 | 69 |
| fr | 2004_10 | 1ujr:A | 2.5 | 2.8 | -5.841333e+00 | -2.413738e+00 | 9.1e-01 | 2.7e+00 | 9.5e+01 | 1.83e+00 | 2.7e+01 | 3.6e+01 | 110 |
| fr | 2004_10 | 1vd4:A | 4.9 | 2.3 | -1.071579e+01 | 4.511978e+00 | 2.4e+01 | 4.2e+01 | 9.2e+01 | 5.42e-01 | 4.2e+01 | 5.0e+01 | 62 |
| fr | 2004_10 | 1xi7:A | 1.9 | 2.0 | -1.299540e+01 | 1.517744e+00 | 4.5e+01 | 6.2e+01 | 1.0e+02 | 4.95e+00 | 6.0e+01 | 6.4e+01 | 47 |
| fr | 2004_10 | 1xjh:A | 1.4 | 2.8 | -1.001333e+01 | -7.013000e+00 | 3.2e+00 | 1.1e+01 | 9.5e+01 | 1.71e+01 | 2.6e+01 | 3.1e+01 | 62 |
| fr | 2004_10 | 1xo3:A | 10.5 | 3.3 | 1.377748e+01 | 1.230165e+01 | 5.0e+01 | 5.9e+01 | 9.1e+01 | 2.76e-01 | 6.6e+01 | 7.3e+01 | 101 |
| fr | 2004_10 | 1xo8:A | 10.3 | 3.5 | 6.321871e+00 | 5.395631e+00 | 2.8e+01 | 3.4e+01 | 6.7e+01 | 1.18e+00 | 4.9e+01 | 5.8e+01 | 151 |
| fr | 2004_10 | 1xoy:A | 16.6 | 4.1 | 7.710551e+00 | 1.093004e+01 | 3.4e+01 | 4.6e+01 | 8.9e+01 | 1.95e-01 | 6.5e+01 | 7.5e+01 | 161 |
| fr | 2004_10 | 1xpj:A | 3.7 | 2.6 | 1.084190e+01 | 1.051209e+01 | 2.2e+01 | 2.8e+01 | 9.4e+01 | 3.82e+00 | 2.1e+01 | 2.4e+01 | 124 |
| fr | 2004_10 | THIS_month:psum | 5.7 | 3 | 10.2 | 8.0 | 24.1 | 33.3 | 90.9 | 3.8 | 42.4 | 48.0 | 97.7 |
| fr | 2006_11_16 | psum | 5.8 | 3.0 | 4.1 | 7.5 | 23.9 | 33.4 | 87.9 | 7.6 | 44.3 | 50.0 | 138.4 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |