| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2004_09 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2004_09 | THIS_month:psum | 3.8 | 2.4 | 18.8 | 13.6 | 28.4 | 33.8 | 56 | 23.5 | 31.8 | 35.1 | 103 |
| fr | 2004_09 | 1r02:A | 0.1 | 0 | -3.817500e+01 | -1.850909e+01 | 1.2e+01 | 1.8e+01 | 4.8e+01 | 75 | 0.0e+00 | 0.0e+00 | 33 |
| fr | 2004_09 | 1rmk:A | 0.8 | 1.2 | -2.908571e+01 | -1.970323e+01 | 1.9e+01 | 3.5e+01 | 6.8e+01 | 45 | 3.5e+01 | 4.2e+01 | 31 |
| fr | 2004_09 | 1srk:A | 3.9 | 3.7 | 3.268332e+01 | 2.708044e+01 | 7.7e+01 | 7.7e+01 | 8.3e+01 | 0.12 | 7.4e+01 | 7.7e+01 | 35 |
| fr | 2004_09 | 1u14:A | 2.0 | 2.8 | 5.019107e+00 | 1.754112e+00 | 6.0e-01 | 7.2e+00 | 6.2e+01 | 12 | 1.1e+01 | 1.5e+01 | 167 |
| fr | 2004_09 | 1u5t:C | 2.3 | 0 | -2.908571e+01 | -2.076472e+00 | 9.0e+00 | 9.6e+00 | 1.2e+01 | 7.1 | 0.0e+00 | 0.0e+00 | 178 |
| fr | 2004_09 | 1uta:A | 2.5 | 2.6 | -2.349231e+01 | -5.280314e-01 | 2.7e+01 | 2.7e+01 | 3.4e+01 | 22 | 2.7e+01 | 3.1e+01 | 77 |
| fr | 2004_09 | 1uw2:A | 0.4 | 1.6 | -2.181429e+01 | -1.000585e+01 | 4.9e+00 | 1.1e+01 | 4.6e+01 | 1.7 | 1.8e+01 | 2.3e+01 | 61 |
| fr | 2004_09 | 1vd2:A | 10.9 | 4.4 | -8.478056e+00 | 1.315911e+01 | 5.6e+01 | 7.0e+01 | 8.1e+01 | 5.0 | 6.3e+01 | 7.2e+01 | 89 |
| fr | 2004_09 | 1w2c:A | 2.9 | 3.3 | -8.036842e+00 | -7.027205e-01 | 1.5e+00 | 4.2e+00 | 2.9e+01 | 15 | 1.2e+01 | 1.4e+01 | 265 |
| fr | 2004_09 | 1wlf:A | 14.4 | 5.0 | -5.691454e+00 | 1.267782e+01 | 5.1e+01 | 5.5e+01 | 6.5e+01 | 0.21 | 5.2e+01 | 5.5e+01 | 164 |
| fr | 2004_09 | 1xc0:A | 1.7 | 2.3 | -8.167699e-01 | -1.716695e+01 | 5.5e+01 | 5.8e+01 | 8.8e+01 | 76 | 5.8e+01 | 5.8e+01 | 33 |
| fr | 2004_09 | THIS_month:psum | 3.8 | 2.4 | 18.8 | 13.6 | 28.4 | 33.8 | 56 | 23.5 | 31.8 | 35.1 | 103 |
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |