| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 665 |
| NWEEKS : | 300 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2004_09 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 5.8 | 3.0 | 4.1 | 7.5 | 23.9 | 33.4 | 87.9 | 7.6 | 44.3 | 50.0 | 138.4 |
| fr | 2004_09 | THIS_month:psum | 5.9 | 2.9 | 22.0 | 12.9 | 35.1 | 45.8 | 87.3 | 14.5 | 55.4 | 60.4 | 103 |
| fr | 2004_09 | 1r02:A | 2.2 | 2.3 | -2.178011e+01 | -1.365947e+01 | 2.4e+01 | 4.2e+01 | 8.5e+01 | 5.40e-03 | 5.5e+01 | 6.4e+01 | 33 |
| fr | 2004_09 | 1rmk:A | 3.9 | 2.3 | 1.612054e+01 | 1.173695e+01 | 8.1e+01 | 8.4e+01 | 9.4e+01 | 1.58e+01 | 8.1e+01 | 8.7e+01 | 31 |
| fr | 2004_09 | 1srk:A | 3.7 | 3.7 | 4.133277e+01 | 2.836196e+01 | 7.7e+01 | 8.0e+01 | 1.0e+02 | 1.81e+00 | 7.7e+01 | 8.0e+01 | 35 |
| fr | 2004_09 | 1u14:A | 13.1 | 2.6 | 8.547373e+00 | 9.084948e+00 | 2.2e+01 | 3.4e+01 | 8.6e+01 | 7.99e-01 | 4.6e+01 | 5.0e+01 | 167 |
| fr | 2004_09 | 1u5t:C | 1.7 | 1.6 | -4.344162e+00 | -3.791681e-01 | 2.2e+00 | 6.2e+00 | 7.8e+01 | 1.54e-01 | 1.6e+01 | 2.0e+01 | 178 |
| fr | 2004_09 | 1uta:A | 9.8 | 3.7 | -8.602817e+00 | 7.540059e+00 | 4.4e+01 | 6.8e+01 | 9.2e+01 | 4.50e+00 | 6.9e+01 | 7.7e+01 | 77 |
| fr | 2004_09 | 1uw2:A | 1.2 | 2.8 | -1.073748e+01 | -6.082371e-01 | 0.0e+00 | 6.6e+00 | 8.7e+01 | 2.74e+01 | 4.1e+01 | 4.9e+01 | 61 |
| fr | 2004_09 | 1vd2:A | 11.1 | 4.2 | -7.101638e+00 | 1.613677e+01 | 5.4e+01 | 7.2e+01 | 9.7e+01 | 5.44e-02 | 7.2e+01 | 7.4e+01 | 89 |
| fr | 2004_09 | 1w2c:A | 1.9 | 2.0 | -3.164767e+00 | 3.346521e+00 | 1.1e+00 | 3.0e+00 | 7.3e+01 | 3.51e+00 | 1.3e+01 | 2.0e+01 | 265 |
| fr | 2004_09 | 1wlf:A | 13.9 | 4.1 | -3.565799e+00 | 1.426118e+01 | 3.9e+01 | 4.8e+01 | 9.6e+01 | 1.55e-02 | 7.0e+01 | 7.4e+01 | 164 |
| fr | 2004_09 | 1xc0:A | 2.9 | 2.6 | -1.317020e+01 | -1.299894e+01 | 4.2e+01 | 6.1e+01 | 7.3e+01 | 1.06e+02 | 7.0e+01 | 7.0e+01 | 33 |
| fr | 2004_09 | THIS_month:psum | 5.9 | 2.9 | 22.0 | 12.9 | 35.1 | 45.8 | 87.3 | 14.5 | 55.4 | 60.4 | 103 |
| fr | 2006_11_16 | psum | 5.8 | 3.0 | 4.1 | 7.5 | 23.9 | 33.4 | 87.9 | 7.6 | 44.3 | 50.0 | 138.4 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |