| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2004_08 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2004_08 | THIS_month:psum | 2.4 | 2.5 | 1.3 | 7.1 | 11.6 | 17.3 | 45.2 | 13.4 | 25.3 | 28.1 | 117.4 |
| fr | 2004_08 | 1q2h:A | 2.6 | 3.1 | -1.790750e+01 | 6.899860e+00 | 1.3e+01 | 3.2e+01 | 5.4e+01 | 1.3 | 3.7e+01 | 3.7e+01 | 63 |
| fr | 2004_08 | 1q8d:A | 1.0 | 1.6 | -1.566154e+01 | -5.656710e+00 | 3.0e+00 | 4.0e+00 | 3.9e+01 | 1.6 | 2.0e+01 | 2.4e+01 | 99 |
| fr | 2004_08 | 1r7c:A | 1.3 | 2.6 | -2.264752e+01 | -1.970323e+01 | 3.5e+01 | 4.8e+01 | 8.4e+01 | 54 | 5.5e+01 | 5.5e+01 | 31 |
| fr | 2004_08 | 1r8g:A | 0.7 | 2.0 | -1.388182e+01 | -1.648715e+00 | 1.8e+00 | 2.9e+00 | 1.3e+01 | 49 | 4.4e+00 | 5.3e+00 | 342 |
| fr | 2004_08 | 1rr7:A | 2.9 | 3.3 | -1.454286e+01 | 3.942896e+00 | 2.0e+01 | 2.4e+01 | 4.5e+01 | 3.5 | 2.2e+01 | 2.3e+01 | 94 |
| fr | 2004_08 | 1s7i:A | 1.1 | 1.6 | -1.388181e+01 | -4.026788e+00 | 0.0e+00 | 0.0e+00 | 3.5e+01 | 27 | 1.6e+01 | 2.0e+01 | 124 |
| fr | 2004_08 | 1sfu:A | 6.9 | 4.9 | -1.322208e+01 | 2.924137e+01 | 6.6e+01 | 6.6e+01 | 6.6e+01 | 0.02 | 6.6e+01 | 6.6e+01 | 70 |
| fr | 2004_08 | 1ss3:A | 2.5 | 2.8 | -1.908194e+01 | -7.677594e+00 | 1.0e+01 | 2.4e+01 | 6.4e+01 | 11 | 4.0e+01 | 4.4e+01 | 50 |
| fr | 2004_08 | 1sse:A | 2.1 | 2.0 | -2.545000e+01 | -1.745143e+01 | 8.6e+00 | 2.0e+01 | 6.9e+01 | 39 | 4.6e+01 | 5.4e+01 | 35 |
| fr | 2004_08 | 1sse:B | 1.1 | 2.6 | -1.489756e+01 | -5.357968e+00 | 4.7e+00 | 8.1e+00 | 4.8e+01 | 3.0 | 2.3e+01 | 2.8e+01 | 86 |
| fr | 2004_08 | 1suy:C | 1.0 | 0 | -4.072000e+01 | -1.796471e+01 | 3.5e+01 | 4.4e+01 | 4.4e+01 | 15 | 0.0e+00 | 0.0e+00 | 34 |
| fr | 2004_08 | 1swx:A | 1.7 | 2.3 | -1.794236e+01 | -2.759135e+00 | 3.5e+00 | 7.6e+00 | 1.7e+01 | 36 | 8.6e+00 | 1.4e+01 | 198 |
| fr | 2004_08 | 1t1j:A | 1.6 | 2.6 | -1.282324e+01 | 6.389239e+00 | 8.4e-01 | 8.4e+00 | 3.2e+01 | 8.6 | 2.4e+01 | 2.4e+01 | 119 |
| fr | 2004_08 | 1tp6:A | 1.3 | 2.6 | -1.505824e+01 | -2.391376e+00 | 3.2e+00 | 7.1e+00 | 3.0e+01 | 1.2 | 1.3e+01 | 1.6e+01 | 126 |
| fr | 2004_08 | 1ttw:A | 10.7 | 4.6 | -4.617168e+00 | 8.812956e+00 | 4.2e+00 | 9.3e+00 | 9.1e+01 | 0.13 | 5.4e+01 | 5.7e+01 | 118 |
| fr | 2004_08 | 1tu1:A | 2.3 | 3.1 | -5.248999e+00 | -1.066427e+00 | 4.2e+00 | 8.3e+00 | 4.5e+01 | 0.16 | 2.8e+01 | 3.2e+01 | 144 |
| fr | 2004_08 | 1tuw:A | 0.8 | 1.2 | -1.566135e+01 | -5.427092e+00 | 0.0e+00 | 2.8e+00 | 3.7e+01 | 0.61 | 1.5e+01 | 1.9e+01 | 106 |
| fr | 2004_08 | 1u4h:A | 2.3 | 3.1 | 1.335764e+00 | 1.470156e-01 | 8.3e+00 | 1.6e+01 | 2.8e+01 | 3.5 | 1.4e+01 | 1.8e+01 | 181 |
| fr | 2004_08 | 1ug7:A | 1.8 | 2.3 | -3.214737e+01 | -4.771875e+00 | 1.1e+01 | 1.3e+01 | 1.5e+01 | 35 | 1.2e+01 | 1.5e+01 | 128 |
| fr | 2004_08 | 1w53:A | 3.9 | 3.1 | -5.207926e+00 | 6.131154e+00 | 1.1e+01 | 1.9e+01 | 7.3e+01 | 4.1 | 3.5e+01 | 3.9e+01 | 84 |
| fr | 2004_08 | 1wlq:C | 2.5 | 2.3 | -1.850909e+01 | 3.331535e-01 | 1.2e+01 | 1.2e+01 | 1.9e+01 | 2.3 | 1.2e+01 | 1.2e+01 | 178 |
| fr | 2004_08 | 1wmx:A | 0.8 | 2.8 | -7.540171e+00 | 2.668349e+00 | 1.7e+00 | 5.8e+00 | 4.7e+01 | 0.41 | 1.3e+01 | 1.6e+01 | 173 |
| fr | 2004_08 | THIS_month:psum | 2.4 | 2.5 | 1.3 | 7.1 | 11.6 | 17.3 | 45.2 | 13.4 | 25.3 | 28.1 | 117.4 |
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |