| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 665 |
| NWEEKS : | 300 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2004_08 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 5.8 | 3.0 | 4.1 | 7.5 | 23.9 | 33.4 | 87.9 | 7.6 | 44.3 | 50.0 | 138.4 |
| fr | 2004_08 | THIS_month:psum | 4.8 | 2.7 | 5.3 | 7.7 | 17.2 | 27.4 | 90.7 | 9.5 | 36.7 | 43.1 | 127.8 |
| fr | 2004_08 | 1q8d:A | 2.9 | 1.6 | -7.185882e+00 | -2.971230e+00 | 3.0e+00 | 8.1e+00 | 8.6e+01 | 4.77e+00 | 2.7e+01 | 3.0e+01 | 99 |
| fr | 2004_08 | 1sse:A | 2.2 | 2.6 | -1.908750e+01 | -1.379647e+01 | 3.7e+01 | 6.6e+01 | 9.1e+01 | 5.39e+01 | 5.1e+01 | 6.3e+01 | 35 |
| fr | 2004_08 | 1sse:B | 5.3 | 2.6 | -7.635000e+00 | 2.317125e+00 | 1.2e+01 | 2.8e+01 | 9.3e+01 | 1.26e+00 | 3.3e+01 | 4.0e+01 | 86 |
| fr | 2004_08 | 1swx:A | 4.5 | 3.5 | 5.359075e+00 | 5.793758e+00 | 1.0e+00 | 1.5e+00 | 9.7e+01 | 1.77e+00 | 2.3e+01 | 2.9e+01 | 198 |
| fr | 2004_08 | 1ttw:A | 15.1 | 4.6 | -3.140021e+00 | 1.993653e+01 | 6.3e+01 | 7.9e+01 | 1.0e+02 | 2.06e-03 | 8.1e+01 | 8.9e+01 | 118 |
| fr | 2004_08 | 1u4h:A | 2.0 | 2.8 | -4.316344e+00 | 3.053364e+00 | 2.2e+00 | 6.1e+00 | 7.7e+01 | 3.96e+00 | 2.3e+01 | 2.7e+01 | 181 |
| fr | 2004_08 | 1wlq:C | 1.9 | 1.6 | -3.770370e+00 | -2.258674e-01 | 2.8e+00 | 3.4e+00 | 9.1e+01 | 1.00e+00 | 1.9e+01 | 2.4e+01 | 178 |
| fr | 2004_08 | THIS_month:psum | 4.8 | 2.7 | 5.3 | 7.7 | 17.2 | 27.4 | 90.7 | 9.5 | 36.7 | 43.1 | 127.8 |
| fr | 2006_11_16 | psum | 5.8 | 3.0 | 4.1 | 7.5 | 23.9 | 33.4 | 87.9 | 7.6 | 44.3 | 50.0 | 138.4 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |