| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2004_07 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2004_07 | THIS_month:psum | 1.8 | 2.5 | 5.1 | 5.1 | 8.9 | 54 | 5.7 | 22 | 25.5 | 114.7 | |
| fr | 2004_07 | 1ojh:A | 2.7 | 2.3 | -1.619741e+01 | -1.103204e+01 | 6.0e+00 | 1.4e+01 | 7.4e+01 | 4.5 | 3.4e+01 | 3.4e+01 | 50 |
| fr | 2004_07 | 1r0d:A | 3.3 | 3.9 | -6.786667e+00 | 6.296365e+00 | 8.5e+00 | 1.2e+01 | 4.8e+01 | 11 | 2.8e+01 | 2.9e+01 | 189 |
| fr | 2004_07 | 1ryl:A | 1.5 | 2.8 | -8.626127e+00 | 3.958302e+00 | 3.2e+00 | 7.0e+00 | 4.2e+01 | 2.9 | 2.0e+01 | 2.1e+01 | 157 |
| fr | 2004_07 | 1s7h:A | 2.0 | 3.1 | -1.174611e+01 | -1.698687e+00 | 1.6e+00 | 4.8e+00 | 2.8e+01 | 17 | 1.2e+01 | 1.4e+01 | 186 |
| fr | 2004_07 | 1t0q:C | 1.3 | 2.3 | -9.851597e+00 | -6.666926e+00 | 2.4e+00 | 7.2e+00 | 7.5e+01 | 0.64 | 1.6e+01 | 2.3e+01 | 83 |
| fr | 2004_07 | 1t6a:A | 2.4 | 3.5 | -4.831285e+00 | -6.246336e-02 | 1.6e+01 | 1.9e+01 | 5.3e+01 | 1.5 | 2.4e+01 | 2.5e+01 | 119 |
| fr | 2004_07 | 1uuj:A | 1.4 | 1.6 | -1.272499e+01 | -8.024179e+00 | 1.4e+00 | 2.7e+00 | 6.5e+01 | 8.1 | 2.0e+01 | 3.0e+01 | 74 |
| fr | 2004_07 | 1wd2:A | 0.5 | 0.7 | -2.181429e+01 | -1.017897e+01 | 1.7e+00 | 5.0e+00 | 4.7e+01 | 0.23 | 2.2e+01 | 2.8e+01 | 60 |
| fr | 2004_07 | THIS_month:psum | 1.8 | 2.5 | 5.1 | 5.1 | 8.9 | 54 | 5.7 | 22 | 25.5 | 114.7 | |
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |