| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2004_05 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2004_05 | THIS_month:psum | 3.7 | 2.6 | 25.2 | 10.8 | 22.8 | 27.9 | 65.2 | 10.9 | 36.7 | 39.6 | 74.2 |
| fr | 2004_05 | 1pvz:A | 1.0 | 0 | -2.908571e+01 | -1.970323e+01 | 4.5e+01 | 4.8e+01 | 6.8e+01 | 35 | 0.0e+00 | 0.0e+00 | 31 |
| fr | 2004_05 | 1r5p:A | 3.7 | 2.3 | -1.299524e+01 | 1.791767e+00 | 1.6e+01 | 2.7e+01 | 5.2e+01 | 0.01 | 3.6e+01 | 4.0e+01 | 90 |
| fr | 2004_05 | 1rso:A | 1.0 | 2.0 | -2.077681e+01 | -8.055722e+00 | 3.3e+00 | 8.3e+00 | 4.8e+01 | 12 | 2.3e+01 | 2.7e+01 | 60 |
| fr | 2004_05 | 1rso:B | 2.8 | 3.5 | -1.650811e+01 | 3.887203e+00 | 1.1e+01 | 1.8e+01 | 6.6e+01 | 9.9 | 3.9e+01 | 4.5e+01 | 56 |
| fr | 2004_05 | 1s1h:O | 5.9 | 4.2 | -1.527000e+01 | 2.671642e+01 | 6.2e+01 | 6.2e+01 | 6.2e+01 | 2.7 | 6.2e+01 | 6.2e+01 | 65 |
| fr | 2004_05 | 1ud0:A | 6.4 | 3.5 | -9.543750e+00 | 1.374924e+01 | 1.5e+01 | 2.0e+01 | 7.9e+01 | 3.1 | 5.4e+01 | 5.4e+01 | 81 |
| fr | 2004_05 | 1ut3:A | 0.4 | 0.7 | -1.796471e+01 | -1.604136e+01 | 0.0e+00 | 5.3e+00 | 8.9e+01 | 35 | 3.7e+01 | 3.9e+01 | 38 |
| fr | 2004_05 | 1v5p:A | 10.4 | 4.1 | 2.528314e+01 | 1.645044e+01 | 4.9e+01 | 5.4e+01 | 6.3e+01 | 0.13 | 5.7e+01 | 5.9e+01 | 126 |
| fr | 2004_05 | 1vk5:A | 2.0 | 3.5 | -7.087529e+00 | 2.282826e+00 | 4.1e+00 | 9.1e+00 | 6.0e+01 | 0.63 | 2.3e+01 | 3.1e+01 | 121 |
| fr | 2004_05 | THIS_month:psum | 3.7 | 2.6 | 25.2 | 10.8 | 22.8 | 27.9 | 65.2 | 10.9 | 36.7 | 39.6 | 74.2 |
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |