| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 839 |
| NWEEKS : | 359 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2004_04 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| fr | 2004_04 | THIS_month:psum | 3.4 | 2.5 | 25.8 | 15.8 | 21.6 | 30.3 | 65.8 | 9.6 | 39.2 | 42.1 | 76.6 |
| fr | 2004_04 | 1nei:A | 2.5 | 2.8 | -1.773797e+01 | -4.548043e+00 | 1.8e+01 | 3.0e+01 | 5.5e+01 | 33 | 3.5e+01 | 4.2e+01 | 60 |
| fr | 2004_04 | 1pv0:A | 2.0 | 1.6 | -1.864674e+01 | -1.022585e+01 | 2.0e+01 | 3.9e+01 | 5.7e+01 | 20 | 3.7e+01 | 3.7e+01 | 46 |
| fr | 2004_04 | 1pyv:A | 0.9 | 1.6 | -1.525432e+01 | -9.224874e+00 | 7.5e+00 | 2.3e+01 | 7.5e+01 | 14 | 2.6e+01 | 3.0e+01 | 53 |
| fr | 2004_04 | 1rk8:C | 0.4 | 0.7 | -1.970323e+01 | -1.850909e+01 | 3.0e+00 | 9.1e+00 | 9.4e+01 | 0.58 | 3.9e+01 | 3.9e+01 | 33 |
| fr | 2004_04 | 1t0y:A | 9.6 | 4.2 | 2.889885e+01 | 1.743003e+01 | 6.1e+01 | 6.1e+01 | 7.1e+01 | 0.02 | 6.8e+01 | 7.0e+01 | 90 |
| fr | 2004_04 | 1umh:A | 0.8 | 2.0 | -1.053103e+01 | -2.972729e+00 | 1.6e+00 | 3.3e+00 | 3.2e+01 | 1.5 | 9.2e+00 | 1.2e+01 | 184 |
| fr | 2004_04 | 1v32:A | 10.0 | 4.9 | 2.276123e+01 | 1.430946e+01 | 5.8e+01 | 6.4e+01 | 6.9e+01 | 0.01 | 5.9e+01 | 6.4e+01 | 101 |
| fr | 2004_04 | 1v92:A | 1.5 | 2.6 | -1.796353e+01 | -1.314949e+01 | 4.3e+00 | 1.3e+01 | 7.4e+01 | 8.0 | 4.1e+01 | 4.3e+01 | 46 |
| fr | 2004_04 | THIS_month:psum | 3.4 | 2.5 | 25.8 | 15.8 | 21.6 | 30.3 | 65.8 | 9.6 | 39.2 | 42.1 | 76.6 |
| fr | 2006_11_16 | psum | 2.9 | 2.3 | 2.3 | 2.9 | 15.0 | 20.2 | 49.7 | 14.2 | 26.2 | 29.5 | 136.5 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |